KEGG   Salvia hispanica (chia): 125213483
Entry
125213483         CDS       T09851                                 
Name
(RefSeq) RNA-binding protein Y14A-like
  KO
K12876  RNA-binding protein 8A
Organism
shis  Salvia hispanica (chia)
Pathway
shis03013  Nucleocytoplasmic transport
shis03015  mRNA surveillance pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125213483
  09122 Translation
   03013 Nucleocytoplasmic transport
    125213483
   03015 mRNA surveillance pathway
    125213483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125213483
   03041 Spliceosome [BR:shis03041]
    125213483
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     125213483
Spliceosome [BR:shis03041]
 Complex C
  Other components
   EJC/TREX
    125213483
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 125213483
NCBI-ProteinID: XP_047970013
LinkDB
Position
3:complement(5044136..5046508)
AA seq 195 aa
MANAEAEALDFEPEEDDLMDEDVGDGSPNRATAPRLKSAITGGGSAPKKTKGRGFRDEAA
AEADRNARMSAPFDSLDSEGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNL
HLNLDRRTGFVKGYALIEFEKFEEAQRAISEMDGAELLTQIMNVDWAFSKGPFRRRNIRR
RSPRGHRSRSPRRRF
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgaatgcggaagcggaggccctcgatttcgagccggaggaggacgatcttatggac
gaggacgtcggcgacggatcccccaaccgagccaccgctcctcgcctgaagtctgccatc
accggcggcggctccgctccgaagaagaccaagggccgtgggtttcgcgacgaggccgct
gctgaagctgaccgcaatgctcgcatgtctgcccccttcgattcgctcgattcagaaggc
ggccctggccccgaacgatctattgaaggatggattattctggttactggagttcatgaa
gaggctcaagaggatgatctacaaaatgcatttggtgattttggagagataaagaattta
cacttgaatcttgatcgtcgtacgggttttgtcaagggctatgctctaattgaatttgag
aagtttgaggaggcacagagggccattagcgagatggatggagctgaactcctaacccag
atcatgaatgttgactgggcattcagcaaaggcccattcagaagaaggaacataaggagg
agatcacctcggggccatcggtccagaagtccaaggaggagattctga

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