KEGG   Salvia hispanica (chia): 125213500
Entry
125213500         CDS       T09851                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
shis  Salvia hispanica (chia)
Pathway
shis04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:shis00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    125213500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shis04131]
    125213500
Membrane trafficking [BR:shis04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    125213500
   mTORC2 complex
    125213500
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_IFT140_2nd Beta-prop_SCAP PROPPIN Beta-prop_IP5PC_F Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Mala_s_1-like Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd Beta-prop_WDR35_2nd CFAP43_N
Other DBs
NCBI-GeneID: 125213500
NCBI-ProteinID: XP_047970041
LinkDB
Position
3:complement(6704042..6707308)
AA seq 315 aa
MSQQPSVVLATASYDHTIRFWEAKSGRCYRTIQYPESQVNRLEITPDKRYLAAAGNPHIR
LFDVNANSPQPVMSYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESR
AAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVA
ANNRGTCYVWRLMQGTQTMTNFEPLHKLQAHDQYILKCLLSPELCEPNRYLATASSDGTV
KIWNVDGFTLEKTLVGHQRWVWDCVFSVDGAFLITASSDSTARLWSMSTGEEIKVYKGHQ
KATVCCALHDGTEPS
NT seq 948 nt   +upstreamnt  +downstreamnt
atgagtcaacaaccatcagttgttctggctactgcaagctacgatcacacaattcgtttc
tgggaagcaaaaagtgggcgctgctatcgaacaatccagtaccctgaatcgcaagtgaac
aggcttgagattacacctgataagcgctacctggctgcagctggaaatcctcatattcga
ctgtttgatgtcaatgcaaacagccctcagccagtgatgagctatgattcgcacactaat
aatgtaatggctgttggatttcaatgcgatggaaattggatgtattcaggatctgaagat
ggcactgtgaagatttgggatttaagagcaccaggttgccagagagagtatgaaagtcgt
gcagcagttaacacagtggttttgcaccccaatcagactgaattgatctctggggaccaa
aatggtaatatccgagtctgggatttgacagcaaattcttgcagttgtgagttggtacca
gaagtcgatacagcagtgcgatccttaactgtaatgtgggacggcagcttggtggttgca
gcaaataaccgtggaacatgctatgtgtggcgtttaatgcaaggaacacagactatgacc
aacttcgagccacttcataaacttcaagctcatgatcaatatatacttaagtgtctactt
tcaccagaattgtgtgagcctaatcggtatctggctactgcatcttcggatggtactgtc
aaaatatggaacgtggatggttttacgttggaaaaaacactagttggtcaccagcgctgg
gtttgggactgtgttttctccgtcgatggtgctttcctaatcacagcttcatcggattca
actgcaagattgtggtccatgtccaccggtgaggagatcaaagtctacaaaggacatcaa
aaggcaactgtgtgctgtgctcttcacgatgggactgagccttcatga

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