Salvia hispanica (chia): 125213536
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Entry
125213536 CDS
T09851
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125213536
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125213536
Ion channels [BR:
shis04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125213536
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
PepSY_TM
IQ
Motif
Other DBs
NCBI-GeneID:
125213536
NCBI-ProteinID:
XP_047970095
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Position
3:complement(4035264..4038814)
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AA seq
713 aa
AA seq
DB search
MDHYRKKFVRFQDSRSEKGLNEQSSSRGGIHPSRLNSVAYSISDKFHRGVEAGSDRIRRF
KGSIRSFSLKRFLTDDEGPRRKTLDPQGPFLQKWNKIFVLSCLIAISLDPLFFYIPIING
EKKCLDLDEKLEIAASILRSFTDIFYLTHIIFQFRTGFIDPYSRVFGRGVLVEDSWKIAK
RYLTSYFIIDILAVLPLPQIAILIIIPKMRGARSLNTKNLLKFVVLFQYIPRVLRVYPLY
KEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERDTTCWIRACGDQSACRN
ASFYCDAEPARFAENLTKLCPIQPPNTTFFDFGIFLDALQSGVVESKDFPQKLFYCFWWG
LQNLSSLGQNLHTSTYVWEIAFAVFISISGLVLFSFLIGNMQTYLQSTTLRLEEMRVKRR
DAEQWMSHRLLPDNLKERITRYEHYKWQETRGVDEENLIRNLPKDLRRDIKRHLCLDLLK
RVPLFEKMDEQLLDAMCDCLKPVLYTEDSYIVREGDPVDEMLFIMRGKLFTVTTNGGRTG
FFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQALSEVEAFALMAHDLKFVASQF
RRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSRKKLEESLREEENRLQDALAKGGSG
SPSLGATIYASRFAANALRALRRNGTRKTRMPERISPMLLQKPAEPDFTAEDK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggatcactaccgcaagaagttcgtgagatttcaagattcgagatcagaaaaaggttta
aatgagcaatcttcgtctagaggtggaatacatccgagcagattgaattcagtagcatac
tcaatttcagacaaatttcatagaggtgtagaagctggatctgatagaattaggaggttc
aagggatcaataagatctttctctttgaagaggtttttgacagatgatgagggacctagg
aggaaaactcttgatcctcaaggaccatttcttcagaaatggaacaagatttttgtcttg
tcttgtctgattgctatctccttggatcccttgtttttctacattccaattatcaatgga
gaaaagaaatgccttgatttggacgagaaattggagattgctgctagcattctacgatct
tttacggatatcttttatctcacacatattattttccaatttcgtaccggtttcattgat
ccttattcacgtgtatttggaagaggagtcctagttgaagattcctggaaaatagcaaaa
agatatctcacatcatactttataattgatattctcgcagttcttccacttccgcagatt
gcaattctcatcatcattccaaagatgaggggagcaagatctttgaacaccaagaatttg
ttgaaatttgtggttttatttcaatatataccaagggttctccgggtgtatcctctgtat
aaagaagtcacaagaacttctggcatacttactgaaacagcatgggctggagctgccttc
aaccttttcctttacatgcttgccagtcatgtgcttggagccttttggtatttgttttca
atagaacgtgacactacatgctggataagagcttgcggagatcaatctgcttgtagaaat
gcttcgttttattgtgatgccgagcctgcaagattcgcagaaaacctgaccaagttatgc
cctatacagcctcctaatacaacattttttgactttgggatattccttgatgctcttcaa
tccggtgttgtggaatcaaaagacttccctcagaagttattttattgtttctggtggggt
ctgcagaatttaagttcccttggtcagaaccttcacacaagcacttatgtctgggaaatt
gcctttgcagtttttatatctatatccggcttggtgctattttcgtttctcattggaaat
atgcagacttatctgcagtctacaactctgaggttagaagagatgagggtgaaaaggcga
gatgcagagcaatggatgtcgcaccgcttacttccagataatttaaaggaacgaatcaca
agatacgagcattataaatggcaggaaactaggggtgttgatgaagagaatcttatccgt
aatcttcctaaggaccttagaagagacataaagcgacatctctgtctagatttacttaag
agggtgccactgttcgagaaaatggatgaacaactgctcgatgcaatgtgcgactgtctc
aaaccagttctttacactgaggacagttacatagtgcgagagggcgatccagttgacgag
atgttgttcatcatgcgtggcaaattgttcactgtgaccactaatggaggaaggacgggt
tttttcaactctgagtatctgaaagctggtgacttttgtggcgaagaactcttaacttgg
gctctggatcctcattcatcatcgaatctccccatctccaccagaaccgtacaagccctt
tcggaagtggaagcatttgccctgatggctcatgatttgaagtttgtggcgtcccagttc
agacggctacacagtaaacagctacgccatactttcagattctactctcagcagtggaga
acctgggcagcttgctttatacaagcagcctggcgccggtattctaggaagaagctcgag
gagtctcttcgcgaagaagaaaaccggttgcaagatgctttggccaagggtgggagtggc
tcgccaagtctgggcgcaaccatctacgcctccagatttgcagcgaatgcgcttcgtgca
ttgagacgcaatggtacgagaaagacgaggatgccagagaggatatcaccaatgctgctt
cagaagccagcagaaccagattttactgctgaagacaaatga
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