Salvia hispanica (chia): 125213749
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Entry
125213749 CDS
T09851
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125213749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125213749
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125213749
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
U-box type E3
125213749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
PUB10_N
ARM_PUB
U-box
ARM_ARMC5
PUB2_N
HEAT_2
MLKL_N
Neurochondrin
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
KAP
Arm_2
zf-C3HC4_2
MCAfunc
HEAT_EZ
RPW8
zf-C3HC4
BORCS6
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
125213749
NCBI-ProteinID:
XP_047970418
LinkDB
All DBs
Position
3:complement(10279676..10285891)
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AA seq
662 aa
AA seq
DB search
MDEDDKAALSRKLIDLVGEISAFSDYRASVKRQYTNLARRLKLLTPMFEEIRDCKEALSE
DSIRALAELAGALESAKELLRFGSEGSKIYLVLERDQIMNRFHEVTAELERALSGISFEK
LDISDEVKEQVELVLAQFLRAKGRVDAPDSELYEDLMCIYNKNSDAGEDIDVLRRLVDRL
QLSGIADLTQESLALHEMVGATGGDPEESIEKMSMLLKKVKEFVQSTNPNIDSTTAENST
PTSSGGKVLTNQKSLVIPNDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHSTCPK
TQQALTSNALTPNYVLRSLIAQWCEANGIEVPKRPGSSRPKAGSACSPAERSKIGALLCK
LTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVQLLSTPDSRTQEHAVTALLN
LSIFEDNKGSIISSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGASGAIPP
LVALLSEGTQRGKKDAATALFNLCIYQGNKGKAVRARVIPTLMRLLTEPQGTMVDEALAI
LAILSSHPEGKSAIGAAEAVPVLVDVIGNGSPRNKENSAAVLVHLCSGDQQYLAEAQELG
VMGPLLELAQHGTERGKRKATQLLERMNRFVETQKAARAAQAENQTQNQASQAPSSGNAE
MS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacgacaaggccgcgctgtctcggaagctgatcgatctggttggcgaaatc
tcggccttctccgactaccgagcctccgtgaagaggcagtacaccaatctagctcggcgg
ctgaagctgttgaccccaatgttcgaagagattcgcgattgcaaggaggcgctgtccgag
gattcgatcagagcgctggcggagctcgcaggcgcgctggaatcggccaaggagttgctc
cgctttggcagcgaggggagtaagatttatctggtcttagagagggatcaaatcatgaat
agatttcatgaagtgacagctgagttggaacgagctctaagtggcatttcttttgagaaa
cttgacatatctgatgaggttaaggaacaggttgagcttgttctcgctcagttcctaaga
gccaagggaagggtagatgcaccagattctgagctgtatgaggatctgatgtgtatttac
aacaagaatagtgacgctggagaagatatagatgtattaaggagattggttgacagacta
cagcttagtggtattgctgacttaactcaagaatcactagctttgcatgagatggttgga
gccactggtggagacccagaggagagcatcgagaagatgtcaatgctgttaaaaaaagtt
aaggaatttgtgcagtcaacaaatccgaatattgattccaccacagctgagaattctacc
ccaacaagtagtggtggaaaagtactgacaaatcagaagagccttgttataccaaatgac
tttcgatgtcctatttccttagagttgatgaaggatcctgtcattgtctcaacaggacag
acatatgaaaggtcgtgtatcgagaaatggctggaagcagggcatagtacctgtcccaag
acacagcaagctctcactagcaatgctctaacgccaaattacgttcttcgaagtctcata
gcacaatggtgcgaagcaaacggcattgaagtacccaagagaccgggcagctctcgcccc
aaggctggatctgcatgttcccctgcagagcgttccaagataggagcccttctctgtaag
cttacatccggcaaccctgaagatcaacggtctgcagcaggtgaaatccgcctccttgca
aagcgtaatgctgacaaccgtgtggctatagctgaagctggcgccatccctctgcttgtc
cagcttttatcgactcctgattcccgcacacaggagcatgctgttactgcgcttctcaac
ctttccatattcgaagataacaagggaagcataatatcctctggtgccgtgcctggtata
gtgcacgtgctcaagaaagggagcatggaagcgcgggaaaatgctgctgccacgctgttt
agcctctcggtgattgacgaaaacaaggtaaccatcggtgcttcaggggcaattcctcca
ttggtggcgctcctcagcgaaggcacccaaagggggaagaaagatgccgcaacagcgctc
ttcaacttgtgcatataccaaggcaacaagggtaaggccgtgagggcgcgcgtcattccc
acattgatgcgactgctcaccgagcctcaaggcaccatggtggacgaagcgctcgccatt
ctggctatactgtccagccatcccgagggaaagtcagccatcggagccgccgaggcagta
cctgttttggtggacgtcatcggcaacggctcacccaggaataaagagaactcggccgcc
gtgctggtgcacctgtgctcgggcgaccagcaataccttgctgaggcccaggaactcggc
gtgatggggccgctgcttgaattggcgcagcatgggacggagaggggcaagaggaaagca
acccagctgctcgagcggatgaacagattcgtggagacacagaaggcggcgcgggcagcg
caggcggagaatcaaacacagaatcaggcgtcccaagcgccgtcgtccggtaacgctgag
atgagttga
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integrated database retrieval system
