Salvia hispanica (chia): 125213821
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Entry
125213821 CDS
T09851
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125213821
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
125213821
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Motif
Pfam:
Glyco_hydro_28
Gp49_Pectate_lyase_like
Motif
Other DBs
NCBI-GeneID:
125213821
NCBI-ProteinID:
XP_047970525
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Position
1:complement(2418032..2419878)
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AA seq
341 aa
AA seq
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MEYFLDEWKKACATDGGTLSVPKGNYELSDIEFSGPCNGETNFVLEGTITAPEDPTPDID
HWIMFHQVDSLSISGTGTLDGNGASYWRTEHDTTIATLKLEKVNKVNIRDIHSINSKKFH
FHIHNCNDVTINNIHATAPESSPNTDGIHLSNSDNIRITGASIATGDDCISIGDGVTNTD
ITGVNCGPGHGISIGSLGKNQGEKEVRSIRVTNCNLKNTKNGLRIKTFAPSPPGLVSDIT
FEGIIVDNVDNPIIIDQHYCPHKKCEGGESSVLINGVKFIDVRGSSSKEVGVKVDCSKSH
PCKDIQLKGVSLTFEGKPTNAVCSSADVQFLGDGQTPSSCS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagtattttttagatgaatggaagaaagcttgtgcaactgatggaggcacacttagt
gttccaaaaggaaattatgaattaagtgatattgaattttcagggccatgcaatggcgaa
accaattttgtactagaaggaactataactgctcccgaagatcctactcccgacatcgat
cattggatcatgtttcaccaggtcgatagcctctcgatctcaggcaccggcaccttagat
ggaaacggagcctcctattggagaaccgagcatgacaccactatagcgacattgaagctt
gagaaagtcaacaaagtgaacattagagacatccattccatcaacagcaaaaagttccac
tttcacatccacaactgcaacgacgtaaccataaacaacatccacgccacagctccggaa
agcagccccaacaccgacggcatccacctcagtaattccgacaacatcagaatcaccggt
gcaagcatcgccactggagacgactgcatctccataggagacggagtcaccaacacagac
atcacaggcgtcaactgtggcccgggccacggcatcagcatcgggagcctcgggaagaat
caaggggagaaggaagtccggtcgattcgggtaaccaattgcaacttaaaaaacaccaaa
aacgggctaaggatcaagacgttcgcgccttctccaccggggcttgtttcggatatcact
tttgagggcattatagtagataatgtggacaatccgatcatcatcgatcaacattattgc
ccacacaagaaatgtgagggtggtgaatcgagtgttttgataaatggtgtaaaattcatc
gacgttcgtggtagctcgagtaaagaagtcggggtgaaggttgattgcagcaaatcgcat
ccttgcaaagacatacaattgaagggagttagcttgacctttgaagggaagccaactaat
gcagtttgctcttcagctgatgttcaatttcttggagatggccaaactccttcaagttgt
tcctga
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