Salvia hispanica (chia): 125213832
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Entry
125213832 CDS
T09851
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03030
DNA replication
shis03410
Base excision repair
shis03420
Nucleotide excision repair
shis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125213832
03410 Base excision repair
125213832
03420 Nucleotide excision repair
125213832
03440 Homologous recombination
125213832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shis03032
]
125213832
03400 DNA repair and recombination proteins [BR:
shis03400
]
125213832
Enzymes [BR:
shis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125213832
DNA replication proteins [BR:
shis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
125213832
DNA repair and recombination proteins [BR:
shis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
125213832
NER (nucleotide excision repair)
GGR (global genome repair) factors
125213832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
125213832
NCBI-ProteinID:
XP_047970540
LinkDB
All DBs
Position
3:complement(21352597..21360215)
Genome browser
AA seq
1079 aa
AA seq
DB search
MGFSAPTAPFRPSSLCPPYFWFCRSCVHFYSVSSSTRVFCRLEDKASQSSQRGIPNGAIS
ADVLELNQKSSYSTFQHNDNQMHYQDRSDFAYRWKNSSLYRGAEAIEEDGQGILEVLNTA
QAANDWGHTIEDWGKATEECRKNKRLFAHGNNTSAKLKTNAGDNRRKTIYEGEGRALSRK
ETQYTGNGRQHVHHISHNQISLGHVGSRVVSYPNHDKKIVSEGHVMTIEAHPSSLGNKRV
KGPKPDKDEVFNIKETASTDNEVVPNDDVGEPFSEKITHPEYSELHERLSQVYEKVLVVD
SIHAAREVVHLLTTQYKDLVHACDTEVANIDVKEETPVDHGEVICFSIYSGPEADFGNGK
SCIWVDVLDGGGEGLIKEFAPFFEDPSIKKVWHNYSFDSHIIENYGLKLSGFYADTMHMA
RLWNSSRRTEGGYSLEALTRDPVVMSDAKKGPGEKVLGKVSMKNIFGRKKLKKDGSEGKI
IVIPPVEELQRDERKLWICYSALDSISTLSLYESLEKKLLKTPWSVDGQYQGSMFDNYCK
YLRPFGELLVKMEREGMLVDRSYLAEIEKVAKVEQQIAADRFRKWASKLCPDAKDMNVGS
DAQLRQLFFGGMQNRKDPNEFLPVKKEFKVPNVDNIIEEGKKKATKFRKIVLSKPEGVNM
VADKFTPSGWPSVSGDALKTLAGKVSADFDFLDEEDEEELPEEENQISSMDNGAPQSVDR
DISAYGTAYSAFGGGQAGIEACHAIAALCEVCSIDSLISNFILPLQGNHISGKDGRIHCS
LNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLAN
CKSMLEAFKAGGDFHSRTAMNMYPHIRKAVENKDVLLEWHPQPGEDKPPVPLLKDAFGSE
RRKAKMLNFSIAYGKTTVGLARDWKVSREEAQETVNLWYSDRQEVLHWQTLRKKQAHNYH
CVNTLLGRARHFPSLKNASSAHKAHIERAAINTPVQGSAADVAMCAMLQISRNKRLKELG
WRLLLQVHDEVILEGPTESSEEAKAIVVDCMSNPFDGKNILRVGLSVDAKCAQSWYAAK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgggcttctctgcgcccaccgcccccttccgcccctcttccctttgcccgccctatttc
tggttttgccgctcttgcgttcacttctactccgtttcttcttccaccagagttttctgc
aggctggaagataaagcaagccaaagttctcagagggggatccctaatggagctatcagt
gctgatgtgctcgaattaaaccaaaagtcgagctacagcacgtttcagcacaacgataat
caaatgcattatcaagataggagtgattttgcatataggtggaaaaattcctctttatat
agaggggcggaagcaatagaggaagacggtcaaggaattttggaagtattaaatactgca
caagctgccaacgactggggacataccattgaagactggggtaaagctaccgaagaatgt
aggaagaacaagagactatttgctcatgggaacaacacatctgcaaagcttaaaacaaat
gcaggagataataggagaaaaacaatatatgaaggagaagggagagcattaagcaggaag
gagacacaatatactggaaatggcaggcaacatgtgcatcatatttcccataaccagata
tctctaggtcatgttggatctcgtgtagtttcttacccaaatcatgacaaaaagatagtt
tcggagggccatgtaatgacaatagaggctcatccaagttccttgggaaataagagagtt
aaaggtcccaaacctgacaaggatgaagtattcaatattaaagaaactgcttctactgat
aatgaagttgttccaaatgatgacgttggtgaacctttcagtgagaaaattactcatcct
gagtactcagaacttcatgagagacttagccaagtctatgaaaaggttcttgttgttgat
agcatacatgcagctagggaagtagtccatctactcactactcaatacaaggatcttgtt
cacgcatgtgatacagaggtagcaaatattgatgttaaagaagaaacacccgtagatcat
ggtgaagtgatatgtttcagtatatactctggcccagaagctgattttggtaatggaaag
tcctgtatttgggtagatgtccttgatggaggtggcgagggtcttatcaaagaatttgca
ccattttttgaagatccgtccattaaaaaagtgtggcacaactacagctttgatagtcat
ataatagagaattatgggcttaaactttctggtttctatgctgatacaatgcacatggct
cgattgtggaactcctctcgaagaactgaaggagggtactctttggaagcactcacaaga
gatccagttgtcatgtctgatgctaagaaaggccctggagaaaaagttcttgggaaggtg
tcaatgaagaatatttttggtcggaaaaaacttaagaaagatggatctgagggtaaaata
attgtcattcctcctgttgaagagttacaacgagatgagagaaaattatggatttgttat
tctgctctggattcgataagcacattgagcctgtatgaaagcctggagaagaaattgttg
aaaactccttggtctgttgatggacaataccaagggtcaatgtttgacaactactgtaaa
tatttacgtccgtttggggagctccttgttaaaatggagagagagggaatgctggtcgat
cgttcttatcttgctgaaattgagaaggttgctaaagtagagcagcagatagctgctgat
agatttcgcaagtgggcctctaaactttgccctgatgcaaaagacatgaatgtgggaagt
gatgcacagttgcgtcagttattctttggtggtatgcagaacagaaaggatccaaatgaa
ttccttccagtgaagaaagaatttaaagttcccaacgtggataatataattgaagagggc
aaaaagaaagccacaaaatttcgtaaaatcgtattgagtaagcctgaaggtgtgaacatg
gtagctgataagttcactccaagtgggtggccttctgttagtggggatgctttgaagact
cttgctggcaaggtctctgcagactttgatttcttggatgaagaggatgaagaagaactt
cccgaagaagagaaccaaatctcctcgatggacaatggagcgccccaaagtgtagacaga
gatatatctgcttatggaactgcttactctgcatttggtggcggacaggcgggaattgaa
gcttgtcatgcaatagctgctctatgtgaagtttgctcaattgattctttgatatccaac
tttattctcccattgcagggaaatcacatttcaggaaaggatgggagaatccactgttct
ttaaatatcaacacagaaactggccgactgtctgctcggcgacctaatctgcagaaccaa
cccgcgttggagaaggatcgttacaagatccgtcaggcatttatagcagcacctggaaac
tctctaatagttgctgattacggacagttagagcttaggattctagctcatctggccaac
tgtaagagcatgcttgaagcttttaaagctggtggagacttccactcgaggactgcaatg
aacatgtatccacacattcgtaaagctgttgagaataaggatgtgcttcttgagtggcat
cctcagcctggtgaagataagcctccagtcccgttgctaaaggatgcttttggttcggaa
agaaggaaagcgaagatgcttaacttttccattgcatatggaaaaacaactgttggactt
gctcgggactggaaggtttctcgtgaggaagctcaggaaacagttaatctctggtacagt
gatagacaagaagtgctacactggcagacactacgcaagaaacaagcacataactatcac
tgcgttaataccttgctagggcgggcccgccacttcccgtctttaaagaatgccagctca
gcacataaagctcacattgaacgtgctgctatcaatacccctgtgcagggaagtgctgca
gatgtcgcaatgtgtgccatgttgcaaatatcaagaaacaaacgtttgaaggagctagga
tggagacttctgttacaggttcatgacgaagtaatcctagaagggccgactgaatcttct
gaggaggccaaggctattgttgtagattgtatgtcaaatccttttgatgggaaaaacatt
cttagagttggtttgtctgttgatgccaaatgtgctcagagttggtatgctgccaagtag
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