KEGG   Salvia hispanica (chia): 125214026
Entry
125214026         CDS       T09851                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
shis  Salvia hispanica (chia)
Pathway
shis03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    125214026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shis03400]
    125214026
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     125214026
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_Vps41 WD40_RFWD3 ANAPC4_WD40 Beta-prop_IP5PC_F RAWUL Beta-prop_DCAF12 Beta-prop_Nup120_160 VWA_3_C
Other DBs
NCBI-GeneID: 125214026
NCBI-ProteinID: XP_047970822
LinkDB
Position
3:15384544..15396249
AA seq 763 aa
MHRVGSSGNTSNSVRTRKEKRLTYVLNDADDTKHCAGINCLALSKSTEQEGNEYLFTGSR
DGTLKRWALSEDSATFSATFESHVDWVNDAVLTGGNTLVSCSSDSTVKVWNCLSDGICAR
TFHQHSDYVTCLAAAEKNSNVFASGGLGGEVFIWDLEASLNPVSKSNDANADDCSTSTNG
LGSLPSTSLRPINSSNNISVHATQSQGYVPIAAKGHKESVYALATNDRGTLLVSGGTEKV
VRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRYCLSGSSDSMIRLWDLAQQRCIHSYAVH
TDSVWALAATPSFSHVYSGGRDLSLYLTDLATRESILVCSKEHPILQLELHGDGIWVSTT
DSSVHRWPAEAHNPLKVFQRGGSFLAGNLSFSRARVSLEGSTPVPVYREPSLTICGTSAI
VQHEILNNKRHVLTKDTGGTVKLWEITRGLVTENYGEVSFEKKKEELFEMVNVPTWFTVD
TRLGSLSVHLDTPQCFSAEMYSADLGIAGKPEDDKVNLARETLKGLLAHWLSKRRQRFGS
QASANGEIPTGKEMSTKTLTLTRIEGDGNSENDSAVYPPFEFLAASPPSIVTEGSHGGPW
RKKITDLDGTEDEKDLPWWVLDCVLNNRLPPRENTKCSFYLHPCEGSNVQVLTQGKLSAP
RILRIHKVVNYVVEKMLLDKPMDNLNADGTFVPNAPGGQIPHPVVGDGSLRSGLKPWQKL
RPSIEILCNNQVLPPDMSLATVRAYIWKKSEDVILNYRIVQGR
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcatcgcgttggcagctcaggaaacacatccaattcagttcgtactcgcaaggaaaag
aggttaacatatgtattaaatgatgcagatgatacaaagcactgtgcaggcataaactgc
ttggctttatcaaaatctacagaacaagaaggtaatgagtatctcttcactggtagtcgt
gatggaacattgaagagatgggcattatcagaagattctgctactttctctgctacattt
gagtctcacgttgattgggtcaatgatgcagttctgacaggtggtaacacgttggtctct
tgctcctctgatagtactgttaaggtatggaattgcttgtctgatggaatatgcgcgagg
acatttcaccaacactctgactatgtcacttgcttggcagcagcagaaaaaaatagcaat
gtctttgcctctggaggccttggtggcgaggtttttatatgggatctggaagcttcacta
aatcccgtttccaaatcaaatgatgcaaatgcagatgattgttcaactagtactaatggt
ttgggatctttgccgagtactagtcttcgtcctatcaactcaagtaataacatttctgtg
cacgccactcaatctcaaggctatgttcccattgctgcaaaaggccataaagagtcagtt
tatgcattggcaacaaatgaccggggaacacttcttgtatctggtggaactgagaaggtt
gtgcgtgtttgggacccgaggacaggttctaaaaccatgaagctaagaggacatacagat
aacataagggcgcttttattggattctacaggcaggtattgcttatccggctcctctgat
tctatgatcaggttgtgggatcttgctcaacagcgatgcattcattcctatgctgtgcac
acagactctgtctgggcattagcagctactccatcattcagtcatgtttatagtggtggg
agggacctttctttgtatttaactgatttggcaacaagagaaagcatattagtatgttca
aaagaacatcctatattgcaattggaactgcacggtgatggtatatgggtttccacaacg
gattcatctgtacatagatggcctgcagaagcgcataatccccttaaagtattccaaaga
ggtggctcatttttagctggcaacttgtcattttcaagggcaagggtttcactggaaggt
tctacacctgttcctgtttatagggaaccgtctctcaccatttgtggaacttcggctata
gtgcaacatgagattttaaataataaaagacatgtcttgacaaaggacactggtggtaca
gtaaagttgtgggaaatcacaagaggtttggtcacagaaaattacggagaggtttcattt
gaaaagaagaaagaggaattgtttgagatggtgaatgttccaacatggttcacagtagat
acaaggcttgggagtctgtctgtgcacttagacacaccgcaatgtttttctgctgagatg
tactctgcagatctagggattgctgggaaaccggaggatgacaaggtcaatttggctaga
gaaaccctcaaagggcttttggcacattggttgagtaaaagaaggcagagatttggatct
caagcgtcagctaacggagaaattcccacaggaaaggaaatgtctacaaaaactttaact
ctaacccgaatagaaggagatgggaattcagagaatgactctgctgtatatccacccttc
gaatttttagcagcttcccctccttccattgttactgaaggctctcatggggggccctgg
agaaaaaaaattactgacttagatggaactgaagatgagaaagacttgccttggtgggtt
cttgattgtgtgctaaataatcgccttcctccaagggaaaataccaaatgtagcttctat
ctgcatccatgtgaaggttccaatgttcaagtcctcacacaagggaaactaagtgctcct
cgcattttgagaatacacaaggttgtcaactatgtggtagaaaagatgcttcttgacaag
ccaatggataatctgaatgctgatggaacttttgttccgaatgcacctggaggccagatt
ccacatccagttgtaggagatggttcactacgatctgggctgaaaccttggcaaaaactt
aggccttctattgagattctttgcaataaccaggttttacctccagacatgagcttggcc
actgttcgggcttacatatggaagaaatctgaagacgttatccttaactacagaattgtg
cagggaaggtga

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