Salvia hispanica (chia): 125214087
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Entry
125214087 CDS
T09851
Name
(RefSeq) vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
shis
Salvia hispanica (chia)
Pathway
shis03250
Viral life cycle - HIV-1
shis03272
Virion - Hepatitis viruses
shis04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125214087
03272 Virion - Hepatitis viruses
125214087
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125214087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125214087
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125214087
Membrane trafficking [BR:
shis04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
125214087
Exosome [BR:
shis04147
]
Exosomal proteins
Proteins found in most exosomes
125214087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
125214087
NCBI-ProteinID:
XP_047970922
LinkDB
All DBs
Position
3:37063851..37068629
Genome browser
AA seq
944 aa
AA seq
DB search
MAVPSSTTTSNIMLAIFEKKTNSVDLYRPLRNFIVINYSEREAQNLEDDLQTLKQLRSEV
ERGGAADSPTARRDLLQNYYRALCVVESRFPISPEKDHVNAVSFIWYDAFKNKQKATQQN
IHLEKAAVLFNLGAVHSQIGLSCDRSAVEGRKQASHSFMAAAGAFAFLKDNVAMKASAGG
STTLDISVECVGLLERLMLAQAQECVYENTIAKGSSPGVCAKISRQVGLFYEDALAALTV
TPLSQHFEKGWISHVQLKAAMFHGEACYRYSLELHGKEEIAEEIARVKIGISALSDARKS
APRGAAQQLLDAVTKLETILKSNLERAVKENDRVYLMRVPPASSLSALPTFSMVKPMVMN
EILDASKEKMFASLVPDSSAKSLSRYTEMVDDIIRTQAEKLQQGSELARVRLREMDLPDS
VLSLEGNTPLPPVLKEDVEAVQICGGPAGLEAELQQLKDLSRVNHEMLIQTEEQLQKEAT
EDAQFRNQFGTRWTRPQSSTLTKNLQDRLNRFAANLKQAAESDARIERSVREHLVLMSIL
DSRPIESALPSLSRPIMSLDAGEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDI
LPKLMATAGSHEDLFRKEISKYDNICEEIAKNLGAQEQLLMHIQAQNDEFAAIFNLEDYK
ASREKAYKQIEAAIAKYREIKENINEGLKFYVTLQDAITLVKQQCSDFVMTRNMQCREMI
DDVQKKLAGLNFQDSKSSSYSFLPSSQPHQTQSSNPQQPLDQGRVPHTSYLQTPPTYQPP
QHPTMASPYQPSQHPTTASPYQPSQHPTTASPYQPSQHPTTASPYQPSQHTTAASPYQAP
QHPTAASTYQQAPQHSTPPAYAQTPPYGYSQPPPAPYQPPASNYPYPPPQHQQHTSAEYG
QSPYGGWQGQYYNAPPQQTGSMPRPPYPAQSPYPPPNQSGYYRQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcccgtcgtccactaccacctcgaatatcatgctcgcgatcttcgagaagaag
accaactccgtcgacctctaccggcctctgcgcaatttcatcgtgatcaattattccgag
cgcgaggctcagaatttggaggacgatctccagacgctgaagcagctgcgctccgaggtc
gagcgcggcggcgcggcggattcgccgaccgcgcggcgtgatctgctccagaactactac
agagcgctctgcgtggtggaatctaggtttccgatatcgccggaaaaggatcacgtcaat
gcggtgtcgtttatttggtatgacgcttttaagaataagcagaaggctactcaacagaat
attcatctagaaaaagctgctgtcctgttcaatttgggggcagtccacagccaaattgga
ctgagttgcgatagatccgcagttgaaggaaggaagcaggcttcacattcatttatggca
gcagctggggcatttgcgtttttgaaggataatgtggcaatgaaggcatcagcgggaggc
tcaactactcttgatatttcggtggagtgtgttgggttgctggagaggttgatgttagct
caggcacaggaatgtgtgtatgagaataccatagctaagggaagcagtcctggagtatgt
gcaaagatttcaagacaggttgggctattctatgaggatgcgttggcagcacttactgtt
acaccattgagtcagcattttgaaaaaggatggatttcccatgttcaacttaaggcagcc
atgtttcatggggaggcctgctacaggtacagtttggagctgcatgggaaggaagaaatt
gctgaagagatcgcacgtgtaaaaattgggattagtgccttatccgatgcaagaaagtca
gctcctagaggggctgctcagcagctcttggatgcagtcactaaactagaaactatatta
aaatctaacttggagagggccgtgaaggagaatgatagagtgtacttgatgagggttcct
cctgccagttctttatcagcacttccaacattttctatggttaagccaatggtaatgaat
gagatattggatgctagcaaagagaagatgtttgccagtcttgtccctgatagcagtgcg
aagtccctttctaggtatactgaaatggtggatgacatcattaggacacaggctgagaaa
ttgcaacagggaagtgaactagctcgggtgaggctgagggagatggatttgcctgattca
gttctttcactggaagggaacactcctttgccacctgttctaaaagaagatgttgaggca
gtacagatttgtggtggcccggcaggtttagaagctgagctgcagcaacttaaagattta
agtagggtgaaccatgaaatgttgattcaaacagaggagcagttgcagaaagaagcaacc
gaagatgcacagttcaggaaccaatttggaactcggtggactaggccacaatccagtacc
ttaacgaagaacttacaagataggttaaataggtttgcagccaatctgaagcaggctgca
gaaagtgatgctcggatagagagatctgttcgggagcatttagtccttatgtcaatcctt
gactctcggcctattgaatctgccctgccaagtctttcaaggccaataatgtcgctggat
gctggtgaagatgctatagttggagccctgaagcagagtctgaggcaattggagactctt
ggtgctcaaagggcaggtcttgaagacatgctcaaagaaatgaagaggaaggatgatata
ttacccaagttgatggctacagctggctctcatgaagatctttttagaaaggagatatcc
aagtatgataacatctgtgaagaaattgcgaagaaccttggagctcaagagcaattattg
atgcatattcaggctcaaaatgatgagtttgctgctatctttaaccttgaagactataaa
gcgtctcgtgagaaggcctataaacagatcgaagctgccatagctaaatatcgagaaatc
aaggagaacatcaatgaaggactgaagttttatgttactcttcaggatgctataaccctc
gtaaagcaacaatgcagcgatttcgtgatgactaggaacatgcagtgccgagaaatgatt
gatgatgttcagaagaaactagctggtcttaatttccaagacagcaaaagcagtagctat
tctttcctgccctcgtcacagcctcatcaaactcaatcgtccaacccacaacagcccttg
gatcaaggacgtgtgccccacacgtcatacctccaaacaccccctacctaccagccacct
cagcacccgacaatggcctctccctaccagccctctcagcacccgacaacagcatctccc
taccagccctctcagcacccgacaacagcatctccctaccagccatctcagcacccgaca
actgcctctccctaccagccatctcagcacacgacagctgcctctccctaccaggcacct
cagcacccgacagctgcctctacctatcagcaggcacctcagcactcaacgccacccgcc
tatgctcagactcctccttacggatactcacaaccaccgccagctccataccagcctccc
gcttcaaattatccatacccacctccccaacaccagcagcatacgagtgctgaatacggg
caatccccatatggtggctggcaaggccaatactacaatgcaccaccgcagcaaaccggt
tcgatgccccgccctccgtacccggctcaatctccctatccacctcccaaccaaagcggc
tactacagacaataa
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