Salvia hispanica (chia): 125214142
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Entry
125214142 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598-like isoform X1
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125214142
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125214142
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125214142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
125214142
NCBI-ProteinID:
XP_047971000
LinkDB
All DBs
Position
3:complement(5647445..5651989)
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AA seq
845 aa
AA seq
DB search
MDDSCAVCAESLEWVAYGACGHKDVCSTCVSRLRFICNDRSCCICKTENDVVFVTKALGD
YTKTISDFTVFPPERREGKMGQYWYHDDTQAFFDDSDHYKMIKAMCRLSCAECDKEDQPD
DGSRRKAKFRNIDHLKGHLFHKHRLIMCSLCLEGRKVFICEQKLYTRSQLSQHISTGDSE
VDGTESERGGFSGHPPCEFCQTPFYGDNELYTHMETEHYTCHICRRQHPGEYEYYGNYDN
LEIHFRRDHFLCEDESCLAKKFVVFTSESEIKRHNATEHGGRMSRSQRSAALQIPTSFRY
RRSSDQENRRGRARTFRRDLADELSLAIQASLETASAAAPNSRARNDHGESIDVDSLISP
LESIGTTDYELPSRYRQAVSQSSMSGTLGDSAFPPLAAGAGGNQHSSQTDASSNSMAAHL
RRQSKKQASSSSSAPAWPVASRTPVLPVKSRQNKKQTSSSSSGPAWPVGSPTPAQPVNNS
HTWPPVTAISGSASSSGQSRAFPEIGSVSSSQSTSARIHPQSAATTSFASSLLSSRASGS
INRLGHSSSAPSLSDRESFASPADFPPVSVVAQSRKSTNDDQSASKAGDVQTANKSLVEK
MRAALGSDEDKFSAFKDISGKYRLGTMDVETYLTYVDQFGLSHLVLELAGLLPNPQKQKE
LIDAYNLHMASRENGWNNDSKKGKGKGKAKGKPVDFGTSSSVKNNLADNVISTVRALQSS
YNAPEEEVEVLSKDGYRSARSELAVTVGASPSQSSAVAVGGTNQNHSNGSGKGKQRKKTS
KFLRARLGDGSAEALLDLKNSNQEDPDSDEGESSSNGPDENVPVRGVWRNGGGQKLLSKK
LGVKK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagctgcgcggtttgtgctgaaagcttggagtgggtggcatacggcgcttgc
ggccacaaggatgtctgctccacctgcgtctctcgcctccgatttatctgcaatgaccgc
agctgctgtatttgcaagacagaaaacgatgtcgttttcgtcaccaaggctttgggggac
tatacgaagacgatcagtgacttcacagtattcccccctgaaaggagagagggtaagatg
gggcagtattggtatcatgacgatacgcaggccttttttgatgattcggatcattataag
atgatcaaggcgatgtgcaggctttcttgcgctgaatgtgataaggaggaccaaccggat
gatggttccaggagaaaagccaagtttaggaacatcgatcatttgaagggccatttgttt
cacaagcataggttgatcatgtgcagcttgtgcttggagggaagaaaggtttttatatgt
gagcaaaagttgtatacaagatcacaacttagtcagcatataagcactggcgactcggaa
gtggatggaactgaaagtgaaagaggtggcttctcaggacaccccccttgtgaattttgc
cagacaccattttatggggacaatgagctttatactcacatggagactgaacattatact
tgtcatatatgtcgaaggcagcatccaggagagtatgagtactatgggaattatgataat
ttggagatccactttcgtcgagatcatttcctctgtgaggatgaaagttgccttgccaaa
aagtttgttgtcttcacttcggaatctgaaataaagaggcataatgctacggagcatgga
gggcgtatgtcacgttcacaacgcagtgctgctcttcagatacctacgagttttcgatat
agacgaagcagtgaccaagagaatcgtcgtggaagagcacggacctttcgccgggatctg
gcagatgaactttctctggctatccaggcaagtcttgagacagcaagtgctgcagcacca
aatagtcgagctcgaaatgatcatggagaaagtattgatgttgactcacttatatcacct
ctggaatctatcggtaccacagactatgagctaccatcaagataccgacaggccgtgtct
caaagttcaatgagtggaacactgggagactctgcatttcctcctctcgcagcgggtgct
gggggtaaccaacacagctctcaaactgatgcttcctcaaactctatggctgctcatctg
cgccgccagagcaagaagcaggcgagctcctcaagctctgctcctgcttggcccgtagct
agtcgtacaccagttctgccagtcaagagccgccagaataaaaaacagactagctcctcg
agctcaggtcctgcttggccagtaggtagtcctacacctgcacagccagtcaacaattct
cacacatggcctccagtaactgctatttctggatctgcatctagttcgggacagagcaga
gcatttccagaaattggatctgtgtcatctagccaatcgacttctgctcggattcatccg
cagtcagctgctactacatcctttgccagttctctactttcatcaagggcttctggaagc
attaatcggctaggtcattcttcatcagcccctagtctttcagaccgcgagtcttttgct
tcacctgccgactttcctccagtttcagtagtagcccagtcacgcaaatcaaccaacgat
gaccaatctgctagtaaggcaggggatgttcaaacagcaaacaaatctctggtggagaaa
atgcgcgctgctctagggtccgacgaagacaaattctctgctttcaaagatatctctggt
aaataccgcctaggcacgatggatgttgagacatacctaacatacgtagatcagttcggt
ttgtctcatcttgttcttgagttggctggacttctccctaatcctcagaagcagaaagag
cttatagatgcatacaatcttcacatggcttcaagagaaaatgggtggaataacgactct
aaaaaaggcaaaggcaaaggaaaagcaaaagggaagccagtagattttggcaccagctcc
tccgttaaaaacaatcttgctgataatgtgataagcactgtaagagcgctgcaatcgagc
tacaacgccccggaggaagaggtcgaagtgttgtcgaaggatggatatcgaagtgcaagg
tcggaactggcagttacggttggtgcttcaccttcccaatcaagtgcagttgctgttggt
ggaactaatcagaatcattccaacggcagtgggaaaggaaagcaacggaagaaaacgtcc
aaatttctccgagcacgtctaggcgatggctctgccgaagctctgttagatctgaaaaac
tccaaccaagaggatccagattctgatgagggtgaatcttcatcgaacgggccagatgag
aatgtcccagttcgtggtgtgtggagaaatggtgggggtcagaagctactgtcgaaaaag
ttgggggtgaaaaagtga
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