Salvia hispanica (chia): 125214230
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Entry
125214230 CDS
T09851
Name
(RefSeq) ABC transporter F family member 4-like
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shis03012
]
125214230
Translation factors [BR:
shis03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125214230
BRITE hierarchy
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
AAA_23
AAA_28
AAA
MMR_HSR1
AAA_15
AAA_22
AAA_16
DUF87
AAA_24
Dynamin_N
AAA_25
MeaB
ABC_tran_Xtn
Motif
Other DBs
NCBI-GeneID:
125214230
NCBI-ProteinID:
XP_047971122
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All DBs
Position
3:37884886..37887805
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AA seq
718 aa
AA seq
DB search
MGKKKSDEAGAGTKSKQGGKEKFSVTELLASMDAKPEKPKKASASTSKPKPKPAPKASSY
IDGIDLPSSDEEEEELGSEEEAHLIEVNSRRNITKPIDTGLTDKELKKRGKKDVLVAQAA
EVAKKEALRDDRDAFTVVIGSRASVLDGENDADANVKDITVENFSVAARGKELLKNTSVK
ISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRTALEAVVSANE
ELVKLREEVAALQDASNMSTGDGEDDDEGNDVGEKLSELYEKLQLMGSDAAEAQASKILA
GLGFTKDMQGRATRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR
WKKTLIVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFEGGYEQRRKEANKKSEAYEK
QLRNAKRSGSRTQQEKVKDRAKFNAAKEASKSKSKGKVDEDEPVAEAPRKWKDYTVEFHF
PEPTELTPPLMQLLEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAG
DLVPTEGEVRRSQKLRIGRYSQHFVDLLIMDETPVQYLLRLHPEQEGLSKQEAVRAKLGK
FGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF
TGGVVLVSHDSRLISRVCQDEEKSQIWVVENGTVEAFPDSFEDYKDELVKEIRAEVDD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaagaaatcagatgaagctggtgctggtacaaagtcgaagcagggtgggaag
gagaagttctcggtgactgaattactcgcgagcatggatgcaaaacctgaaaagccgaag
aaagcaagcgcctccactagtaaacccaagccaaaacctgctcctaaagcctcttcttat
attgacggtatagatcttccttcatctgatgaagaggaagaggaattgggctcagaggag
gaggcacatctgattgaggtaaacagccgcagaaatattacaaagcctattgacacaggt
ctcaccgacaaagagttgaagaagcgtggaaagaaggatgtgcttgtggctcaggctgca
gaggtagctaaaaaggaggcactcagggatgatcgtgatgcgtttactgttgtaattggt
agccgggcttctgtacttgatggtgaaaacgatgctgatgctaatgtaaaagatataaca
gttgaaaacttctctgttgctgctcgagggaaagaactgttgaagaatacttcggtgaaa
atctctcatgggaagagatatggattggttgggcccaatggaatgggtaaatctaccctg
ttaaagcttcttgcttggagaaagatacccgtgcccaaaaatattgatgtacttttggtt
gaacaagaggtcgttggtgatgatagaacagctcttgaagcagttgtttcagccaacgaa
gaacttgtcaaacttcgagaagaagttgctgctttgcaggatgcatcgaatatgtccact
ggtgacggcgaagatgatgatgaagggaatgacgtgggagagaagctgagtgaattgtat
gagaagttgcagttgatgggatcagatgctgctgaggctcaagcttctaaaattcttgct
gggttgggttttactaaagatatgcagggtcgagcaacacggtcctttagtggtggttgg
agaatgagaatttcattggccagagcactttttgttcagcctactttgttgctgttggat
gagcctacaaatcatcttgacctcagggctgttctctggttggaagaatacttatgccgg
tggaagaaaactcttattgttgtctcacatgacagagattttctaaataccgtttgcaac
gagattatccatctccatgatttgaagcttcacctttatcgtggaaattttgatgatttc
gaaggtggatatgagcagcgccgcaaagaggcaaataagaagagtgaggcttatgaaaag
cagctgagaaatgctaagagatctggcagtcgaactcagcaggagaaggtcaaggatcga
gccaaatttaatgctgccaaggaagcctcgaagagcaagagtaagggtaaggttgatgag
gatgagcctgtagcagaggcaccacggaaatggaaagattacacagtggagttccatttc
cctgagcctactgagctaacaccaccactcatgcaactactcgaagttagctttagctac
ccaaatcgcgaggacttcaggctgtctaatgtcgatgtgggcattgatatggggactcgt
gtagcaattgtcggacccaatggagctggaaaatcaaccttgctcaaccttcttgcaggt
gatttagttccaacagagggtgaggtgaggagaagtcagaaactgaggataggcagatac
tcgcagcactttgtggatctcctgataatggatgaaacgcccgttcagtatctacttcga
ttacatccggaacaagaagggctcagcaagcaagaggccgtccgggcaaagctgggcaag
tttggacttcccagccacaaccatctgactcctattgcaaaactatccggagggcagaag
gcgcgcgtggttttcacatccatatccatgtctaagccgcacattctacttctggatgag
ccgaccaatcatttagatatgcagagtatcgatgcattggcagacgcgctggatgagttc
acaggaggagtcgttctcgtcagccatgactctaggcttatatcccgcgtgtgccaagat
gaagaaaagagccagatatgggtggtggaaaacggaaccgttgaggctttccctgattca
ttcgaagactacaaggatgagcttgtcaaggaaatcagagccgaggttgacgattga
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