KEGG   Salvia hispanica (chia): 125214276
Entry
125214276         CDS       T09851                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
shis  Salvia hispanica (chia)
Pathway
shis03420  Nucleotide excision repair
shis04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125214276
  09124 Replication and repair
   03420 Nucleotide excision repair
    125214276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:shis03051]
    125214276
   03400 DNA repair and recombination proteins [BR:shis03400]
    125214276
Proteasome [BR:shis03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    125214276
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      125214276
SSDB
Motif
Pfam: XPC-binding UBA UBA_7 ubiquitin CUE UBA_RAD5A UBA_3 Dsc3_N SOG2
Other DBs
NCBI-GeneID: 125214276
NCBI-ProteinID: XP_047971176
LinkDB
Position
3:complement(24311684..24316271)
AA seq 337 aa
MLIHQGKVLKDETTLEENKVAENSFVVIMLSKTKASSTGGTSSAPPSNNPQPASNTSQPT
LPVTAAPSPAPIVAPVQSAPESSPVPVPSPAPAPSTDVYGLAASNLVAGTNLESTVQEIF
DMGGGSWDRDTIVRALRAAYNNPERAVEYLYSGIPEQAEIPPVAQPPAGVQPVNPSSQAT
QPAVPPSGPNANPLDLFPQGLPNMGSNAAGAGTLDFLRNSQQFQALRAMVQANPQILQPM
LQELGKQNPQLVRLIQEHQADFLRLINEPVEGEGNILGQLAEAAPQAVTVTREEREAIER
LESMGFDRALVLEVFFACNKNEELAANYLLDHMHEFE
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgcttattcatcaagggaaagtgctcaaggacgagacaactctagaggagaacaaagtt
gcagaaaatagttttgttgtgattatgttgtccaagaccaaggcttcatcaactggagga
acgtcatctgctccaccatcaaacaatccacaacctgcgagtaatacatctcagccaaca
ttacctgtaacagcagctccttctcctgcaccaattgttgcccccgtgcaatcagctcct
gaatcttctcctgttccagttccttctcctgcccctgctccctcaacagatgtgtatggt
ctagcagcatcaaatcttgttgctggaactaatctggagtccactgttcaagaaattttt
gacatgggtggaggaagctgggatagagatacaattgttcgtgccctaagggctgcatat
aataatcctgaaagagctgttgaatacctctattctggtattccagagcaagcggaaatt
cctcccgtggctcaacctcctgcaggtgtgcagcctgtaaacccttcatcccaggctacg
caaccagctgtacctcccagtggccccaatgctaatccgttggatctttttcctcagggt
cttccaaatatgggttctaatgcagcaggtgctggcacattagattttcttcgtaatagt
cagcagtttcaagccctacgagccatggtgcaagcaaatcctcaaattttgcagcctatg
ctccaagaacttggaaagcagaatccacagcttgtaagattgatccaagaacaccaggct
gacttcctacgcctgataaatgaacctgttgaaggcgagggaaatatacttgggcaactc
gctgaagcagcgccacaggctgtgactgttactcgtgaagagcgggaagcaattgaacgt
cttgaatcaatgggttttgatcgagctttggtactggaagtcttctttgcatgcaacaag
aatgaagagctggcagcaaactacctgctggatcatatgcacgaatttgaatga

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