KEGG   Salvia hispanica (chia): 125214323
Entry
125214323         CDS       T09851                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125214323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125214323
Spliceosome [BR:shis03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125214323
 Complex B
    125214323
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3
Other DBs
NCBI-GeneID: 125214323
NCBI-ProteinID: XP_047971259
LinkDB
Position
3:2819521..2827258
AA seq 958 aa
MSARKKTPFQKHREEEEAKKKRAEDETARLYQEFVESFQADNTPGSKAFVRGGTINPNEK
LKNDSIGGNSKDEGSGIKKGSRYVPSFIPPPMATKGKEYEKKKEEKPKEREKGKSRNIDH
FMEELKHEQEMRERRNQDREYGRDTRHVDNSAPSSRFDELPDEFDPMGRPGSFDDGDPQT
TNLYVGNLSPQVDENFLLRTFGRFGPVASVKIMWPRTEEERRRQRNCGFVAFMNRTEAQA
AKDEMQVCGVVVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGATVILSGPSGPPV
TAVPSQNSELVLTPNVPDINVIPPDDDHLLHIIDTMALYVLDGGCAFEQAIMERGRGNPL
FSFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPPLPTTKGFEHEK
EAGSTYAAGKSKRVEMERTLTDAQRDEFEDMLRALTLERSQIKEAMGFSLDNADAAGEVV
EVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDLY
RSVTGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATFLRSSNSGVTPFHSICGDAP
ELERKAGSAEAGDGEKFNQDAALAIGKGAAMRELLSLPLSELERRCRHNGLSLVGGREIM
VARLLYLEEAEKQRGYELDDELKSAHSQSSSGRYPSGQKELISERDPGKISVRGGKMDDS
VQSMGRGPIISSPDLLPEINNGEGKNESILPSSKWAREDEESDEERDKSTRDLGLTYSSS
GSENAGDAVHKTEEPDLTTDASNSAYLDSGGMNEEQRQKMRRLEVALMEYRESLEEQGIK
NPEEIERKVAVHRSRLLVEYGLVDSNAHASGRSKXSTKVKKRLSLHNFSILKKRTSNFLS
LSLERDRRRDRDRPHEMDSDRGRERERGREKSGSRERDDHDRERTRERDRDRERRRVK
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgagtgcccggaagaagacaccatttcaaaagcacagagaagaggaagaggcgaagaaa
aagagggcagaggatgaaactgcgcggttatatcaggaatttgtagaatcgtttcaagca
gataacacaccagggtcaaaggcttttgtcagaggtggtaccatcaacccgaatgagaag
ctgaagaatgattccataggtggaaattccaaagatgagggttctggtataaagaaaggg
agtaggtatgttccatctttcatcccaccaccaatggcaacaaagggtaaagaatatgaa
aagaaaaaagaggaaaaaccaaaggagagagagaaagggaagtcgaggaatattgatcat
tttatggaggaactgaagcatgaacaggaaatgagggagagaaggaatcaagatcgtgaa
tatgggcgtgatacacgccacgtggacaattctgcgccatctagcaggttcgatgagctg
ccagatgaatttgatccaatgggaagacctggatcatttgatgatggagatccacagacc
acaaatctatatgtgggcaatttgtcacctcaggttgatgagaatttccttttgcggact
tttggaagatttggtccagttgctagtgttaaaatcatgtggccaaggacagaagaggaa
cggagacggcaaaggaattgtggattcgtggcttttatgaatagaactgaagctcaagct
gctaaggatgaaatgcaagtttgtggggtggtggtctatgaatatgaattgaaaattggg
tggggaaaatctgtttctcttccatcacaggcacttcctgctccaccccctggacatatg
gccataaggagcaaggagggggcaactgtcatattgtctggtccttctggtcccccagta
actgctgttccaagccaaaactctgaattggtacttacaccaaatgtacctgatataaat
gttattcctcctgatgatgatcatctcctacatattattgatacaatggctctctatgtt
ctggatgggggctgtgcttttgaacaagcaataatggagcgaggccgtggaaatcctcta
tttagttttttgtttgagcttggttcgaaggaacatacttactatgtgtggaggctctat
tcatttgctcagggtgatacacttcagcgatggcgaacggaaccttttatcatgatcact
ggtagtggaagatggataccccctccattaccaacaacaaaaggcttcgagcatgaaaag
gaagctgggagcacttatgctgcagggaaaagcaaacgtgtggagatggaacggacactg
acagatgcccaaagagatgaatttgaagacatgttacgtgcattgacattggagagaagc
cagataaaagaagccatgggattttctctagacaatgctgatgctgcaggagaggtggtc
gaagtattgactgagtctttgactcttaaagaaactccaattcccacaaaagttgctaga
ctcatgttagtctcagacatcctgcacaatagcagcgctcctgtgaaaaatgcatctgct
tatcgtaccaaatttgaagcaactttaccagacattatggaaagcttcaatgacttgtat
cgtagtgtaactggacgaattacagccgaagccctaaaggaacgtgttttgaaagttctt
caagtatgggctgactggtttctgttctcggatgcatatgtcaatggactgcgagctacc
tttcttcgatctagtaactcaggtgtaacccctttccattctatatgtggtgatgcccct
gagttagagaggaaggctggttctgcagaagcgggtgatggggaaaagtttaaccaagat
gctgctttagcaattggtaaaggagctgccatgagggagttattgagtttgccccttagt
gaactggaaagacgttgcagacacaatgggttatcactggttggtggaagagaaataatg
gtcgctcgattgctttatctggaggaggcagaaaagcaaaggggttacgaactagatgat
gagttaaagtctgctcatagccagtcaagctctggaagatacccaagcggacagaaggag
ttaatctcggaaagggatccagggaaaatatcagtaaggggtggtaaaatggatgacagt
gtgcagtcaatggggagaggaccaattatttcctccccagacttactacctgagattaac
aatggcgaaggaaaaaatgaatcaattctcccttcctctaagtgggctagagaggatgag
gaaagtgatgaggagcgtgataaaagtactagagacctggggttgacttattcatcttct
ggtagtgaaaatgctggtgacgctgtccacaaaacagaggagccggaccttactactgat
gccagtaattcagcatatctagacagtggtggcatgaatgaagagcagagacaaaaaatg
aggcgtcttgaggttgctttgatggaataccgcgaatcccttgaagaacaggggataaag
aatccggaggaaatcgagagaaaagttgctgtgcacaggagtcggctgctggttgaatat
ggtctagttgactcaaatgcacatgcttctggcagaagtaagtagagtaccaaggttaag
aagagattgtcattacataacttttcaatactaaagaagcgaacctcaaatttcttgtca
ttgtcattagagcgggacagacgccgtgaccgggacagaccacacgagatggatagtgac
agaggaagggagcgggagaggggccgtgaaaagagtggcagcagggagagggatgatcac
gacagagaaaggactcgcgagagagacagagatagagaaaggaggagggtaaaatga

DBGET integrated database retrieval system