Salvia hispanica (chia): 125214395
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Entry
125214395 CDS
T09851
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125214395
Membrane trafficking [BR:
shis04131
]
Protein recycling
Others
EARP complex
125214395
Endosome - Golgi transport
Tethering complex
GARP complex
125214395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
Vps54_N
RINT1_TIP1
XhlA
DUF401
LXG
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
125214395
NCBI-ProteinID:
XP_047971357
LinkDB
All DBs
Position
3:43410142..43420152
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AA seq
822 aa
AA seq
DB search
MAAPDKQSALDYINQMFPTEASLSGVEPLMQKIHSEIRRVDAEILAAVRQQSNSGSKARE
DLAAATHAVQELLYKMQEIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQAMASKRQYKEAAAQLEAVNQLCSHFEAYRDFQKITELREKFKSIKQILKSHV
FSDFSSLGTGKETEESNLLQQLSDACLVVDALEPSVREELVKNFCSRELTSYQQIFEGAE
LAKLDKTERRYAWIKRRLRTNEEIWKLFPSSWHVPYLLCIQFCKLTRTQLVDILNNLKEK
PDVGTLLLALQRTLEFEEELAEKFGGGSRNKESGSDTGEDTTESSSQTISDIRKKYEKKL
AAHQGSESEDQDGHKDLSVPDAGFNFRGIISSCFEPYLSVYVELEERTLMEHLEKLVQEE
TWEIEEGSQTNILSSSMQVFLIIRRTLKRCSALTKKQTLFNLFKVFQRVLKAYATKLFLR
LPKGGTGLVAAATGMDGQIKTSDKDERLICYIVNTAEYCHTTSGELAENVSKIVDPQYAD
SIDMSEVQDEFSAVITKALITLVHGIETKFDSEMAAMTRVPWGTLESVGDQSEYVNGINT
ILTSSIPVLGRLLSPIYFQFFLDKLASSLGPRFYLNIFKCKQISETGAQQMLLDTQAVKT
ILLEIPSLGKQVSAAAGYSKFVSREMSKAEALLKVILSPIDSVADTYCALLPEGTPSEFQ
RILDLKGLKRTDQQSILDDYNKRGAGTYQQSIKTVVPSAPNTTVAPNQPTPAGIIPLKEE
IVARAAALGRGAATTGIRRILALTESTTKDRKDGPLRKLFIG
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacctgacaagcagagcgctttggattacatcaatcagatgttccccacagag
gcctctctatctggtgttgagccccttatgcagaaaatacatagtgaaatccgtagggtg
gatgctgagattttggctgctgttcgccagcagagtaattcagggagcaaggcccgggag
gaccttgcagcagctactcatgctgtccaggaactcttgtacaaaatgcaagaaataaaa
actaaagcagagcaaagtgaaacaatggttcaggaaatatgccgtgacatcaagaaactg
gattttgcaaagaagcatataactactacaattactgcccttcatcgtcttactatgcta
gtatctgctgtagaacaacttcaagctatggcttctaaaagacaatacaaggaggcagct
gcacaacttgaggctgtcaaccagttatgcagtcattttgaggcttacagagattttcag
aagatcacggagctaagagaaaaattcaagagcatcaaacaaattttgaagtctcatgtg
ttctcagatttctctagcttaggtacaggtaaagagaccgaggaatctaatttactgcag
cagctatctgacgcatgtctggttgttgatgcccttgagccatcagttagagaagagtta
gtaaaaaatttctgtagtagagagcttacttcataccagcaaatttttgagggagcagaa
ctggcaaagttggataaaacagaaagacgatatgcttggatcaagcgccgcctacgaacc
aatgaggagatttggaaactattcccctcttcatggcatgtcccttatctgctttgcatc
cagttctgcaagttgacgaggacacaactggtagacatcctcaacaatcttaaagaaaaa
ccagacgttggaacattgttactggctttacagcggactttagagtttgaggaagaacta
gcagagaaattcggtggtggaagtcgcaacaaggaatcaggaagcgacactggggaagat
acaactgagagtagcagtcagactatttcagacattcgaaagaaatatgagaaaaagctt
gcagcacatcaaggaagtgagagtgaggaccaagatggccacaaagatctgtctgtgcct
gatgctgggttcaattttagagggatcatttcatcatgctttgaaccttacttgtcggtc
tatgttgaactggaggaaagaactcttatggagcatttggagaaacttgtccaggaagaa
acatgggaaattgaagaggggagtcaaactaatattttatcaagcagtatgcaggtgttt
ttgatcatcagaaggacgttaaagagatgcagtgctctgacaaaaaaacagacattgttt
aatttattcaaggtattccaaagagttcttaaagcatatgctacaaagcttttcttaaga
ttgccgaagggtggtacaggacttgtagcagctgctacaggaatggatggtcagatcaag
acatctgacaaggatgaacgtttgatctgctacatagtcaacacagctgaatattgtcac
acaacgtcaggtgaattggctgaaaatgtatccaaaatagttgatccccagtatgccgat
agcatcgacatgtctgaagtgcaggacgagttctcagcagttataacaaaagcactgata
actcttgtgcatggtatagaaacaaagtttgactctgaaatggcagcgatgacacgtgtt
ccttggggcacacttgaaagtgttggcgaccaatcggaatatgtgaatggcataaataca
attctgacttcaagcattcctgttcttggaaggcttctttctcctatatatttccaattc
ttcctcgataagcttgcatcatcgcttggtccacgcttctatctcaatatcttcaaatgc
aagcaaatctcggaaaccggagctcaacaaatgctgctggatacacaagctgtcaaaaca
atccttctggaaattccttcccttggaaaacaggtatctgccgctgctggctactcgaaa
tttgttagccgtgaaatgagcaaagctgaagcactgttgaaagtcatattgtcccccatc
gactctgtggctgatacatattgtgctctactgcccgagggtactccttctgagtttcaa
cgaattctggatcttaagggcctcaaaaggactgaccagcaaagcatactagacgactac
aacaagcgtggggcagggacttatcagcaatccattaaaacagtcgttccatcggcacct
aacaccacagtggcgcctaatcaacccacacctgctgggatcattccattgaaggaagag
attgtagcaagggctgccgctctggggagaggggctgccacaaccggaatccgcagaatc
ctagcattaaccgagtcaactaccaaagatcgcaaggatggacctctgaggaaacttttc
attggatga
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