Salvia hispanica (chia): 125214482
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Entry
125214482 CDS
T09851
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125214482
Transcription factors [BR:
shis03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125214482
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Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
DUF7128
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
125214482
NCBI-ProteinID:
XP_047971486
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Position
3:46780374..46784499
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AA seq
520 aa
AA seq
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MAASSSSPFLSLRDENEQPQQQQQLLPSAAAAAPANKRRRNQPGNPNPDAEVIALSPKTL
MATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLRQKSTKEVRRKVYLCPEPSCVHHDPS
RALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVHSDWKAHSKTCGTREYRCDCGTLFSRR
DSFITHRAFCDALAQESARNLNAPSLTSIGSHLLGLSQHDQMNQGALSSHDILRLGRPGQ
QYETLVSPGGFRPSPRGLFLHPNHDHDHQDHQNQSPHSAMLPNKSSLQSLMQLPQLHMNN
TANTSSNSSAAGLFNLSFFPGNNNNNAASTMDGGAHHSAAGDDSTLFSSGNLMSIAIPSL
YSTSQAMQTPSGGQMSATALLQKAAQMGSTATNNGGASSSLLKSFGKSPDHHSFGGSSVY
GGSNSGGGNHLHDLMMNSIAAAEGGFEQAEMEEYRGFHGGNSNSQQSGFSSLEQAGRLTR
DFLGVGEIVRSVREQQSGMDHLGSLDLQGKTQPFGGGSFQ
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcttcttcctcgcctttcctctcattaagagatgaaaacgagcagccacag
cagcagcagcagcttctcccttcagcagccgcggcggcgccggcgaacaagaggcggcgg
aaccagccgggaaatccaaatccggatgcggaggtaatcgcgctgtcgccgaagacgcta
atggcgacgaaccggttcgtgtgcgaggtgtgcaacaaagggttccagagggagcagaat
ctgcagctgcaccggcgcggccacaacctgccgtggaagctccggcagaagagcacaaag
gaggtgcggcggaaggtgtatctctgcccggagccgagctgcgtccaccacgacccgtcc
cgggcgctcggcgacctcaccggaatcaaaaaacactactcgcgaaaacacggcgagaag
aaatacaaatgcgagaaatgctccaaaaaatacgccgtccattccgattggaaagcccat
tccaaaacctgcggcaccagagagtacagatgcgactgcggcactctcttctccaggcgt
gacagtttcatcacacaccgagccttctgcgacgcgctggctcaggagagcgcgcggaac
ctgaacgcgccgtcgctaaccagcatagggagccacctcttagggctctcccaacatgat
cagatgaaccaaggagccctatcaagtcatgacatactcagactgggcaggcccggccag
caatacgaaaccctagtcagcccgggagggttccgcccctccccgcgtgggctattcctg
cacccaaatcacgatcacgaccatcaagatcatcaaaatcaatctccccatagtgccatg
ctgcccaacaagtcatcattgcaaagcctcatgcaacttccccagctccacatgaacaac
actgccaacacctcctccaactcttccgctgccggtctcttcaacctcagctttttcccc
ggcaacaacaacaacaacgccgcctccaccatggatggcggcgctcaccactccgctgct
ggagatgactccaccctcttctcatctggtaatctcatgagcattgcgattccatcgctg
tacagcacatcgcaggcgatgcaaaccccaagcggagggcagatgtcggcgacggcgctt
ctccagaaggcagctcagatgggctccaccgccaccaataacggcggcgcctcgtcgtcg
ctgctgaagagctttgggaagtcacccgaccaccacagtttcggtggcagcagcgtctat
ggagggagcaacagcggcggcggcaaccatctgcacgacttgatgatgaactccatcgcg
gcggcggagggaggcttcgagcaggcggagatggaagagtacagagggttccatggtggg
aatagcaatagtcagcagagtggattcagcagcttggagcaagcggggaggctgacgagg
gattttcttggagttggagagattgtgagaagcgtgagagagcagcaaagtgggatggat
catctcggctctttggatttgcagggaaaaacccaaccttttggaggggggagttttcag
tga
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