Salvia hispanica (chia): 125214507
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Entry
125214507 CDS
T09851
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125214507
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125214507
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125214507
Membrane trafficking [BR:
shis04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
125214507
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
125214507
NCBI-ProteinID:
XP_047971515
LinkDB
All DBs
Position
3:complement(17609665..17619047)
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AA seq
1009 aa
AA seq
DB search
MDSSPSQSPGRSTESPHGSSRRASGYATTSSLAKSVSDAGSQSFSSILNNPNPSSSLIGW
WSSSTAVPVPEFVPLPPAPKLGSELTRSDFLPYINAVSESHSHFVEILRQHDRDHEGQGG
LFGGGSAGEALVACLREVPALYFKEDFQLEDGATFRAACPFRTMSENVALQERLSQYLDV
VELHLVKEISMRSSSFFEAQVQLEDLNSKILQGCERVRELKETIRLLDSDLVGSARKVQE
LSGKRGDMIALQSKLRLMLSVNQAVSTLQLLVASADCLGALDIIDDLQHILEGDELIGLH
CFRHLREHVTASVESVNSILSAEFIRASMRGADSMDVSVVTTITSTGKYEEVKLEEERSS
HFQDQLLPLVIGLLRTGKLPAVLRIYRDTLASDIKTSVKVTVLNMHLESDSISGEGIGDT
DGGGSSLGSKLKSLSPDSFVKLLQEIFKIVQTHLLRASEVKRAIEWIMGNLNGHYAADSV
AAAIAHGASSPETAQETDGQAISLSQQSSQNTSRTTSAHGRGYEAGNPNLSRSFRADILR
ENAEALFAACDAAHGRWAKIVGIRSQIHPKLKLQEFLGVYNISQEFISSTEKIGGRLGYS
IRGTLQSQAKSFIEFQHESRMSKMRALLDQENWSEIDVPDEFQVIVNSLCSSESVISGES
GGASDDTAVTSSEVVSSSDGPSESDAGPLNTSQSVERPDSNGTYTDPLRSSVPTENSNAD
VSTSSNGNNASTKERGKSALRMLYFKGVAYHMVNCGLYLVKMMSEYVDMNSFLPTLSAEV
VHRVAELLKLFNSRTAHLVLGANALQVSGLRSITARHLAMASQVISFTYAIIPEIRRILL
LKVPETYKVLLQSEIDRVAADYKNHRDEIYSKLVQIMRERLLFHLRSLPQIVEGWNRSEG
TELQPSQFAQSLTKEVAYLLRTLTKHLHEEDVQAIFGQVVTILHSQIADAFSKLEISTPQ
AKRSLRCEIEHLLGCIRSLPSDNLSKSTPPNWGPLDEFLAQQIGSEAGE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcgccttcccaatcgccgggaaggtcgacggaatcgcctcatggaagctct
agaagagcatcggggtacgccacgacctcgtcattggctaaatcagtctccgatgccggc
agccagagcttctcctccatcctcaacaaccctaacccttcctcctccctcatcggctgg
tggtcctcctccaccgccgtccccgttccggaattcgttccattgccgcccgcgccgaag
ctcggatctgagcttacgcgatcggatttcctgccttacatcaacgccgtgtcggaatcg
cactctcactttgtggagattctccggcagcacgatagggatcacgaggggcagggtggt
ctttttggcgggggctcggcgggggaggcgctggtggcgtgtttgagggaggttccagcg
ttgtatttcaaggaggatttccaattggaggatggagccacgtttagggctgcgtgcccc
ttccggacgatgtcggagaatgtggcgttgcaggagaggttgtcgcagtatttggatgtg
gtggagctgcatttggtgaaggagatttcgatgcggtcaagctcgttctttgaggctcag
gtgcagttggaggatttgaattcgaagattctgcaagggtgcgagagggtcagggagttg
aaagaaacgattaggcttttggattctgacttggttggctccgctaggaaggtgcaggag
ctgagcggtaagcgaggggatatgatcgcgttgcagagtaagctgagactcatgctttca
gtcaatcaggcagtctccactctccagttgcttgttgcatctgcagattgtcttggagct
ttagatattattgatgacctgcaacatatattggaaggagacgagttgattggcctacat
tgctttcgacatcttcgtgaacatgtaacagcttcagtggagtcagttaacagcattctt
tcagcagaatttatccgtgcatctatgcgtggtgctgatagtatggatgtatcagtagtg
actaccataacctccactggaaaatatgaagaagttaaattggaggaagaaagatcttca
cattttcaagatcagcttctccctcttgtcattggattacttagaacaggaaaattaccg
gccgtcttgcgaatatacagagatacactagcttctgatataaagacttctgtcaaagtg
acagttttgaatatgcatctagagtcagattccatctctggagaggggattggggatact
gatggtgggggttcatcactaggaagtaaattgaaaagtctgtcacctgatagctttgtg
aagcttttacaggaaattttcaagatagtgcagacacacttattacgggcttctgaagtc
aaaagagcaattgaatggatcatgggaaatctcaatggtcactatgctgccgactctgtt
gctgctgctattgcacatggtgcatcatctccagaaacagctcaagaaactgatggtcag
gctatttccctttcacaacaatcttcacaaaataccagcagaaccacgtccgctcatggg
agaggttatgaagcaggaaatcctaatctatcaagaagtttccgagctgatatcttgaga
gagaatgcggaggctctatttgctgcttgcgatgctgctcatggaagatgggccaaaatt
gttggaatccgttctcaaattcatcccaaacttaaattgcaagaatttcttggtgtttat
aatatcagtcaggaatttataagttcaacagagaagattggtggaaggctggggtatagc
attcgtggaacacttcaatcacaagctaaatccttcattgagttccagcatgaatctcga
atgtctaagatgagggctctccttgaccaagaaaattggtctgagatagatgtaccagat
gagtttcaggtcattgtcaattcactatgttcttcagaatctgtgatttctggagagagt
ggtggtgcttctgatgatactgcagttacttctagtgaagtggtatcaagcagtgatggt
ccttccgagtcagatgctggtccattgaacacatcccagagcgtcgagcgtccagattct
aatggaacatacactgatccattaaggtcaagtgtgccaactgagaacagcaatgctgat
gtcagtacttcatctaatggaaacaatgccagcacaaaagaacgtggtaaatctgccctg
cggatgctttattttaaaggtgttgcatatcacatggtgaattgtggcctatatttggtg
aagatgatgtcagagtatgtagatatgaatagttttttgcccacattatctgcggaagta
gttcatcgtgttgctgagctcttgaaattattcaattcaaggactgctcatctcgttctt
ggagcgaatgccttacaggtgtctggtttgagatcaattacagctaggcatctggctatg
gcaagccaagtgataagtttcacgtatgccatcatacctgaaattaggagaattctctta
ctcaaagtgccagagacgtataaagtgttattgcagtcagagatcgaccgagtagcagct
gattacaaaaatcaccgtgatgaaatttattcaaagctggttcagataatgagagagaga
ttgttgtttcatctacgtagcttgccacaaattgttgagggttggaatagatccgagggc
actgagttacagcctagccaatttgctcagtctcttaccaaggaagttgcatatcttcta
cgtacattaactaaacacctgcacgaagaggatgtccaagctatttttggacaagtggtc
actattctgcactcccaaattgctgatgcattttcgaagttagagataagcacaccacaa
gcaaaacgaagtcttcgctgcgaaatcgagcatctccttggatgcatcaggtcattacct
tctgataatttgagcaaatctactccgccaaattgggggccacttgatgaattcctggcg
caacaaattggctcggaagctggtgaatag
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