Salvia hispanica (chia): 125214520
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Entry
125214520 CDS
T09851
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125214520
Spliceosome [BR:
shis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125214520
Complex C
U4/U6.U5 tri-SnRNP related factors
125214520
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
125214520
NCBI-ProteinID:
XP_047971535
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Position
3:complement(8742428..8744711)
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AA seq
504 aa
AA seq
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MNNSMEISDNSLEYQRASWNALRKSINGLVNKVTAANIRNIVPELFAENLIRGRGLFCRT
CLKSQLASPGFTDVFAALVSVVNAKFPQVGYLLLRRIVLQLQRAYKRNDKTQLVAAVKFI
AHLLNQRIVDELIGLELLTLLLEKPTDDSVEVAVGFVAECGSLLQDLCPKGMNGVLERLR
GILYEGDIDKHVQFLIEGLFALRKAAKFQIMRPELDLVEQDDQFTHQVSLLDEIDGESGL
DVFQPDPQFVENEKMYEDLKKQILPEDEDDEDQIADSVDSNEEEDEEQIKDETGTDLVNL
RRTIYLTIKSSLDFEEAGHKLLKIDISGMEKELCVMLLECCGEETTYSRYYGLLGQRLCL
MNRIHQESFEKCFADQYSMIHQEVETVKLRNVAKLFAHLLAMDALHWRILDCIQLTEEET
TSSSRIFLKIFFHELSGHLGIWLLNQRLSQDSFESIFPKDNPKNTRFAINFFTSIGLGGI
TENLREYLKNMQNEGKQKKRKTNV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcaatggaaatctcggataacagccttgaatatcaaagagcatcatggaac
gctctgaggaagagcatcaatggattggtgaacaaagtgaccgccgcgaacatcaggaac
atcgttccggagctgtttgctgaaaatctgattcgaggccggggtttattctgtcgaaca
tgcctcaagtcccaactcgcgtcgccgggattcaccgacgttttcgcagctttggtttct
gtcgtcaacgccaagttccctcaagtaggctatcttttgctgcggaggatcgtactgcaa
ctgcagagggcgtataaacgcaacgacaagacacaactagttgcggcggtgaaattcata
gctcacctgttgaatcagcggatagttgatgagcttatcggccttgagctgctgacgttg
ctgctggagaagccgaccgatgatagtgttgaagtagctgttggctttgttgcagaatgt
gggtccttgctgcaggacctttgccccaaaggaatgaatggtgtgcttgagaggttgcga
gggattctttacgaaggagatatagataagcatgtccagttcttgattgaaggcctcttt
gcgttgcggaaggcagcaaagtttcagattatgcgtccggaactggacctggtggagcag
gatgaccaattcactcatcaagtttctctcttggatgagatagatggtgaaagtggttta
gatgtgttccagccagatccccagttcgtggagaatgagaagatgtatgaggacctaaag
aagcaaatattacctgaagatgaagatgatgaagatcaaattgcagattcagtggatagc
aatgaggaagaggacgaggagcagataaaagacgagaccgggacggacttggttaacctc
cggagaaccatctatttgacaatcaagtcaagtcttgattttgaagaagctggacataag
ttgttgaagatcgacatatctggtatggagaaggagctatgcgtcatgcttttggagtgt
tgcggtgaggagacaacttacagccgctactacggactcctcgggcagcggttgtgtctg
atgaacagaatccaccaggagagcttcgaaaaatgttttgccgaccagtactccatgatt
catcaggaggtggagactgttaaactgagaaatgttgcaaaactattcgctcatttgctg
gccatggacgcgttgcattggcgcatcttggactgcattcagttaacagaagaggaaaca
acttcttcgtctcggatcttcctcaagattttcttccatgagctgtccggccacctgggc
atttggttgcttaatcaacgccttagtcaagactcgtttgagtctatttttcccaaggac
aatccgaagaacactaggtttgctatcaacttcttcacttccattggacttggtgggatc
acagagaacctgcgtgagtatctcaagaacatgcagaacgaaggaaagcagaagaaaagg
aaaacgaatgtatag
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