Salvia hispanica (chia): 125214549
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Entry
125214549 CDS
T09851
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
shis04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125214549
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125214549
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125214549
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125214549
03036 Chromosome and associated proteins [BR:
shis03036
]
125214549
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125214549
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125214549
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125214549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EF3_N
HEAT_EZ
PDS5
Adaptin_N
SCD
CLASP_N
Cnd1
TAF6_C
INTS7_N
TPR_TNPO3_IPO13_3rd
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
125214549
NCBI-ProteinID:
XP_047971579
LinkDB
All DBs
Position
3:complement(36353241..36357355)
Genome browser
AA seq
586 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGEEHAHVLLQPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDSFIPLVKRLAAGEWFTARVSACGLFQIAYPSAPDMLKTELRSMYSQLCQDDMPMVR
RAAATNLGKFAATVEAAHLKTDIMSMFEDLTQDDQDSVRLLAVESCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILDPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGPEWAMQHIVPQV
LEMVTNPHYLYRMTVLQAISLLAPVMGSDITCSKLLPVIVNATKDRVPNIKFNVAKVLQS
MIPIVDQSVVEKTIRPSLVELSEDPDVDVRFFANQALQSIDNAMSS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtggatgagccactgtatccaatagcagtcctgatagatgagttaaagaac
gaagacattcagctgcggttgaactccattcgtaggctgtccaccattgcgcgtgcactt
ggggaggagaggactagaaaggagttgattccattcttgagcgagaacaatgatgatgat
gatgaggtgctgcttgccatggctgaagagttgggtgtctttattccatatgttggagga
gaagaacacgctcacgtgctactccagcctctagaaacactttgcactgtggaggagaca
tgtgtgagggacaaagctgtggagtcgttgtgcagaattggatcacaaatgagggagagt
gatttggtcgactcgtttattcctcttgtgaagagactggcagcaggcgagtggtttacg
gcccgtgtctctgcttgtggtttatttcagattgcatatccaagtgccccggatatgcta
aagacagaattaaggtcaatgtacagccaattgtgtcaagatgatatgccgatggtgaga
agagcggctgcaacaaatttggggaagtttgctgctacggtcgaagctgctcatctcaag
actgatatcatgtctatgttcgaggacctcacacaagatgatcaagattctgttcgctta
ctagctgttgagagctgcgctgctcttggcaagttgttggagcctcaagattgtgttgcc
cacattctccctgtgattgtcaacttctcacaggataagtcttggcgtgttcgttacatg
gtcgccaatcagttgtatgagctttgtgaggctgtggggcctgaacctactaagactgat
ttagttcctgcatatgtgcgcctgctccgagataatgaagccgaagtgcgaatagcagct
gccggaaaagttacaaaattctgtaggattcttgatccagagcttgctatccagcatatc
ctcccctgcgtaaaggaattgtcatctgattcttcgcaacatgtaagatctgctttggca
tctgtcattatgggaatggctcccgtcttaggaaaggatgcaacgatcgaacaacttctt
cccatattcctctccctcttgaaagacgaattccctgatgttcgcctcaatatcattagc
aagctggaccaagtcaatcaggttataggaatcgacctactttcccaatctttactacca
gccatcgtcgagctggcagaagatagacattggagagtcagacttgccatcatagagtac
attcctctgttggctagtcagttgggtgttggatttttcgacgacaagctcggtgccctt
tgcatgcagtggctgcaggataaggtttactcgatccgagaagctgctgctaataatttg
aagcgtctggccgaggaattcggtcctgaatgggcaatgcagcatatagttcctcaggtc
ttggaaatggtgacaaacccacactatttgtaccgtatgaccgtgctacaggcaatctcg
ctacttgctccggtcatgggctccgacataacatgctctaaattattgcccgtcattgtc
aacgcgaccaaggacagggtgcccaacatcaaattcaacgtggccaaggtgctgcagtcg
atgatccccatcgttgatcaatccgtggtggagaagacgatccgtcccagtttggtagag
ctctctgaggaccctgacgtcgatgtccgtttcttcgcgaaccaagcgctccagtcgatc
gataatgccatgtcgagctag
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