Salvia hispanica (chia): 125214558
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Entry
125214558 CDS
T09851
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125214558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125214558
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125214558
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
125214558
NCBI-ProteinID:
XP_047971593
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Position
3:19026968..19031061
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AA seq
575 aa
AA seq
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MDQDHKKLKESSFPCEVLEKVLSLIDSHKDRNSASLVCKDWYDAERWTRSNLFIGNCYSV
SPEIVARRFPKIKSVRLKGKPRFSDFNLLPQNWGANVHAWLVMFAKVYPSLEELRLKRMT
VSDESLDLLARSFPGFKALSLSSCDGFTDEGLKAIATHCRNLTELDIADSATEDIGGGWL
SCFPESFTSLEILNFASLQCEVSFDALERLVSRCRALRVLQVNESINLEQLQRLLVQIPH
LTRLGTGSFMQEITVRQYEDLQTAFSNCKNLQALSGLWDATSAYLPFVYGACASLTFLNL
SEANLQSGELAKLLPHCTSLRRLWVIDTVGDKGLEAVGSSCPLLEELRVFPLDPYDLDNQ
QGVTEAGFLAVSRGCPNLKYVLYFCRKMTNDAVVTIVQNCPDFTHFRLCIMNPGEPDHLT
NEPMDEAFGAVTKTCTKLRRLSVSGLLTDKAFEYIGKFAKNLETLSVAFAGSSDRGMQCV
LEGCPKLRKLEIRDCLFGNAALLSGLDKYETMRSLWMSACNLTIKGCRLLAKEMPRLNVE
VIQDEWSDETHANKVYVYRSVAGPRRDAPPFVLTL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatcacaagaaattgaaagaatcatcattcccatgtgaagttttggagaag
gtattatcactcatagattcacacaaggataggaactcagcctcccttgtttgcaaagat
tggtatgatgctgagagatggacaagatccaatctttttatagggaattgctattcagtg
tctcccgagatcgtggctcgaaggtttcccaaaatcaagagtgttaggctcaaagggaag
ccaagattctcagattttaacttgctgccccaaaattggggtgctaatgttcatgcttgg
ctggttatgtttgctaaggtttatccgtcactcgaggagctgaggctcaagaggatgact
gtcagtgatgagagcttggatctcttggccaggtcattcccgggcttcaaggctttatca
ttgtcaagttgcgatggtttcacagacgaaggtctcaaagcaattgcaactcactgcagg
aacttgactgagcttgatatagcggatagtgcaacagaagatattggcggaggttggcta
agttgcttccctgagagcttcacctcattggagatactaaattttgccagccttcagtgt
gaggtgagttttgatgccctcgagagacttgtcagccggtgcagagcgttaagggttctg
caggtcaacgaaagcatcaacttggagcagctgcaacggctccttgtgcaaattcctcat
ttaacaaggcttggcaccggctccttcatgcaagaaattacagtccgtcagtatgaggat
ctccaaactgcattcagcaattgcaagaatctccaagctctttcgggtttatgggatgct
acttccgcatatctcccttttgtttatggagcttgtgcaagtctcactttcttgaatttg
agcgaagcaaatctccaaagtggcgaactagcaaagcttctccctcactgcactagtcta
cgtcgcctttgggtgattgacaccgttggagacaagggtcttgaggctgttgggtcgagc
tgtccgttgcttgaagaactcagagtcttcccccttgatccgtatgatctagataatcaa
caaggggtgacggaggcgggcttcttggctgtttctcgtggctgcccaaacctcaaatac
gtcctctacttctgccggaagatgaccaatgacgctgtcgtaaccatagtgcagaattgc
cccgatttcacccatttccgcctctgcataatgaatccaggcgagccggatcacctaaca
aatgagcctatggacgaggcctttggcgctgtgaccaaaacatgcaccaagctccggaga
ctatcggtgtccggccttctcaccgacaaggctttcgagtatataggaaagttcgccaag
aatctcgagactctgtccgtggccttcgccggcagcagcgacaggggcatgcagtgcgtc
ctcgaaggctgcccgaagctgaggaagctcgagataagggattgcctgtttggaaacgct
gcgctgctctccgggctggacaaatacgagacgatgcggtcgttgtggatgtccgcttgt
aacctgaccatcaaagggtgcaggctgcttgcaaaggagatgccgaggctcaatgtggag
gtcatccaggatgagtggagcgacgagacgcacgccaacaaagtctatgtgtatcggtcc
gtggctgggccgcgacgggacgcacccccgttcgtcctcactctgtga
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