Salvia hispanica (chia): 125214579
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Entry
125214579 CDS
T09851
Name
(RefSeq) long chain acyl-CoA synthetase 8 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00061
Fatty acid biosynthesis
shis00071
Fatty acid degradation
shis01100
Metabolic pathways
shis01212
Fatty acid metabolism
shis04146
Peroxisome
Module
shis_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125214579
00071 Fatty acid degradation
125214579
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125214579
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shis01004
]
125214579
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125214579
Enzymes [BR:
shis01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125214579
Lipid biosynthesis proteins [BR:
shis01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125214579
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of breast milk
125214579
Exosomal proteins of breast cancer cells
125214579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125214579
NCBI-ProteinID:
XP_047971620
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All DBs
Position
3:17218914..17223406
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AA seq
760 aa
AA seq
DB search
MFDSKQYTLNKRKAYLKFPRFARSSRAPILNKEGSKYLITIKMGNLGNWSLMSLIKDNGT
YGIACAAMVAIVIPILLSVVIGGRRKLKQRAVPVEVGGEAGYAMRNVRSVKLVEVPWEGA
TTMAALFEQACRKYSQQKLLGSRKIIAKDTVTSSDGRKFEKLHLGEYQWETYQQVFDRVC
NFASGMIKLGHDVDSRAAIFSDTRAEWLIAFHGCFRQNVTVVTIYASLGEEALIHSLNET
QVSTVICDSKQLKKLIAVRSSLTSIRNIIYFDDEESSSDTSIINEMSNYKVSSFSEVEKL
GRDSRVNPNLPIKKDIAVIMYTSGSTGLPKGVMMTHGNIVATAAAVMTVVPSIGSRDFYL
AYLPLAHVFELAAETVMITAGVAIGYGSALTLTDTSNKIKKGTMGDASALKPTLMAAVPA
ILDRVRDGVLKKVEEKGGVAKKLFDIACRRRLAAIEGSWFGAWGLEAKLWDIILFNKIRS
ILGGQIRFMLCGGAPLSGDTQRFINICIGAPIGQGYGLTETCAGAAFSEADDISVGRVGP
PLPCCYIKLVSWDEGGYRTSDKPMPRGEIVVGGASVSAGYFNSEAKTAEVYKVDEKGMRW
FYTGDIGRFHPDGCLEIIDRRKDIVKLQHGEYISLGKVEAALSSSNFVENIMVYADPFHN
FCVALVIPARHVLEGWADKSGFKYSDFAELCEMPEAMKEVQQSLAKAAKQEKLDKFEVPA
KIKLLPEPWTPESGLVTQALKLKREQVKAKFKDDLENLYK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattctaaacaatacacattgaacaagagaaaagcatatctcaagtttcccaga
tttgcgcgatcgagtagagctccaatcctcaataaggaagggagcaagtatcttataaca
atcaaaatggggaatcttggaaattggagtcttatgtcgcttatcaaagataatggaaca
tatggaattgcttgtgctgccatggttgccatagttatacctatcctcctttctgtggtt
attgggggtaggagaaagttgaagcagagagcagttccagttgaagttggtggtgaggct
ggttacgcaatgcgcaatgttagatcggtcaaattagttgaagttccttgggaaggggcc
acaactatggcagcattgtttgagcaggcatgcaggaagtattcacagcagaagcttctc
gggagtagaaaaataattgctaaagacactgttacttcaagtgatggcagaaaattcgag
aagcttcacttgggtgagtaccagtgggaaacgtatcagcaggtatttgatcgtgtgtgc
aactttgcttctggtatgattaaattagggcacgacgttgactcccgtgctgctattttt
tctgacacacgagcagagtggctcatcgcatttcatggatgctttaggcagaacgtcact
gtcgtcaccatatatgcttctttaggagaggaagccctgattcactcattaaatgagact
caagtgtcaactgtgatttgtgactctaagcaattgaagaagttgattgcagtgcgttcg
agcttgacaagcattagaaacataatttattttgatgatgaagagtcttccagtgatacc
agcatcatcaatgagatgagtaactataaggtttcctcattttctgaggttgaaaaactt
ggaagagacagccgtgttaatcctaatttacctatcaagaaagatattgctgtcattatg
tatacaagtggcagtacaggcctcccaaagggtgttatgatgacacatggcaatattgtc
gctactgctgcagcagttatgacagtggtcccatcaattggaagcagggatttctactta
gcatacttgccccttgctcatgtttttgaattagctgctgagactgtcatgataactgcg
ggtgttgcaattggctatgggtcagcactaacgttgacagacacatccaacaaaattaaa
aaaggaactatgggagatgcttctgcattaaagcctactttgatggcggcagttccagct
atacttgatcgtgtcagggatggagttctgaagaaggttgaggaaaaaggaggtgttgca
aagaaactttttgacattgcttgcagacgccgattggcggctattgaaggaagctggttt
ggggcatggggactggaagctaagttgtgggatataattctctttaacaagataaggtct
atccttggaggacagatccgctttatgctttgcggtggagctcctttatctggagataca
caaagatttatcaacatttgcataggagcccccattggtcaagggtatggtctgacagaa
acatgtgccggagccgctttttctgaggcggatgatatttctgttggccgtgttggccct
cctcttccttgttgttacatcaagcttgtgtcttgggacgaaggcggttacaggacatca
gataagcctatgcctcgaggagagattgttgtcggtggagcaagcgtgagtgctggttat
ttcaacagtgaagcgaaaactgcagaagtatacaaggttgatgagaaaggcatgcgctgg
ttctatacgggtgatatcgggaggttccaccccgatggatgccttgagatcattgacaga
aggaaagacattgtgaagcttcaacacggggagtacatctcactcggaaaggttgaggct
gcactctcatcaagcaatttcgtagagaatatcatggtgtacgcagatccgttccacaac
ttctgtgtcgccctagtgatacctgcacgccatgttcttgagggatgggctgataaatcc
ggattcaagtattcagatttcgctgagctgtgtgagatgccggaagctatgaaagaggtt
caacaatcactagccaaggctgcaaaacaagagaaactggacaagttcgaggtcccggca
aagataaagttgttgccagagccatggactccagaatcaggcctggttactcaagcactc
aaattgaagagggagcaagtgaaggccaagtttaaggatgatcttgagaatttgtataaa
tga
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