Salvia hispanica (chia): 125214635
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Entry
125214635 CDS
T09851
Name
(RefSeq) GTPase LSG1-1-like isoform X1
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125214635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125214635
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
GTPases
125214635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
MeaB
Motif
Other DBs
NCBI-GeneID:
125214635
NCBI-ProteinID:
XP_047971696
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All DBs
Position
3:11489246..11493512
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AA seq
589 aa
AA seq
DB search
MPKGEKIVLGRALVKHHNQMIRETKEKGKLYRSQHKKVLESVTEVSDIEAVIEQADEAHR
LYSSLNPGQFPINLDSASGTIDMTPEERKEQQKREEALHASSLRIPRRPPWNAKMSVEEL
DDNEKRAFLEWRRSLARLEDNENLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPLF
YRCPDLEEYAREIDEHKNTLLLVNKADLLPFSVREQWANYFHEHGILFLFWSAKAATAAL
EGKELSLSIGTQQDLANSGTKVYGRDELLARLQAEAENIVLKRSRSKSTDVDSSDVHSHD
ESVSEHAPPRNVVVGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISEKLTL
CDCPGLVFPSFTSSRYEMIASGVLPIDRLTEHRAAVQVIADRVPRSVIESVYKIKLPKPK
SYELQSRPPLAAELLRAYCASRGYVASSGLPDETKASRLMLKDYIDGKLPHYEMPPDISN
DEDDGEDATEHSSPHESDLSDDEDPPVAADEAAAGLEHELSDLNSFDIDNGLTSAKTAVK
KRETKPHKQHKKPQRKKDRTWRVKDNDGDGMAVVRVVQKPASGRGPVIA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagggagagaaaatcgtcctcggacgagctttagtgaagcaccataatcagatg
ataagggagaccaaggagaaaggcaagttataccgaagccagcacaagaaggttctcgaa
tccgtgactgaggtcagcgacatcgaagccgtcatcgaacaggccgacgaagctcaccgc
ctttactcctctctcaatcctggccaattccccatcaatttggattctgcttccggcaca
attgatatgacaccagaagaaagaaaagagcaacagaagagagaggaagctttgcacgcc
agcagtctccgtattcctcgaaggccaccatggaatgctaaaatgtctgttgaagagctt
gacgataatgaaaaacgagcatttctagagtggcgccgcagtcttgcaaggctcgaggac
aatgaaaatctagttcttactccatttgagaaaaatctggatatttggagacagctttgg
agagtgcttgaacgcagtgatctgatagtgatggttgttgatgcaagagacccgcttttc
taccgttgccctgatttagaggaatatgcacgagagattgatgaacacaaaaacactctg
ctcctcgtgaacaaggcagatcttctgccattctctgttagggaacaatgggctaattac
ttccatgaacatggtattctctttcttttctggtcggctaaagctgcgactgctgcttta
gaggggaaggagctcagtttgtccattggtacccagcaagacttagctaattctggaacg
aaagtatatggtagagatgagctacttgcgcggctgcaagctgaagctgagaatattgtc
ttaaagagaagccgatctaagtccactgacgtggactcatcagacgtgcattctcatgat
gaaagtgtttctgagcacgcaccacctcgcaatgtagttgtcggatttgttggatatccc
aacgtaggaaagagttccacaatcaatgctttggtgggagagaagaggaccggtgtaacc
tcaactcctggaaagaccaaacatttccagacattgataatatccgagaaacttactctc
tgtgattgcccaggactggtgtttccatccttcactagttcaagatacgagatgattgca
tctggggtcttgcctatcgatcgcttgacagagcaccgtgcggctgtgcaggtgattgca
gatcgagtgccaagatccgttattgagagcgtctacaaaatcaaattgccaaaacccaag
tcatacgagctacaatcacggccccctttggcagcagagcttctaagagcatactgtgcc
tctcgtggttatgtagcctcaagtggactaccagatgagaccaaagcttcacgcctgatg
ctcaaggattacattgatgggaagcttccccattatgaaatgccaccagatatatcaaat
gatgaagatgatggcgaggatgcaaccgaacacagctctccacatgaatcagacctatct
gacgatgaagatcctccagttgctgcagatgaagctgcagctggtctggagcacgagctg
agtgatctgaattctttcgacatcgacaatgggttgacttctgccaagactgctgttaag
aaaagggaaactaaacctcataaacagcataagaagccccaaagaaagaaggataggacg
tggagggtaaaagacaacgatggagacgggatggcggtagtcagggtagtccaaaagcca
gcaagtggaagaggccctgttattgcttga
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