KEGG   Salvia hispanica (chia): 125214817
Entry
125214817         CDS       T09851                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03030  DNA replication
shis03410  Base excision repair
shis03420  Nucleotide excision repair
shis03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125214817
   03410 Base excision repair
    125214817
   03420 Nucleotide excision repair
    125214817
   03430 Mismatch repair
    125214817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shis03032]
    125214817
   03400 DNA repair and recombination proteins [BR:shis03400]
    125214817
Enzymes [BR:shis01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     125214817
    6.5.1.6  DNA ligase (ATP or NAD+)
     125214817
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     125214817
DNA replication proteins [BR:shis03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    125214817
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     125214817
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     125214817
   NER (nucleotide excision repair)
    Other NER factors
     125214817
   MMR (mismatch excision repair)
    Other MMR factors
     125214817
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 125214817
NCBI-ProteinID: XP_047971938
LinkDB
Position
3:complement(11015869..11025067)
AA seq 795 aa
MFSFCSCRHTSLLVSLSLNVATKLTSRSPVSISSNHFFNSTTLNPSARTMSGSSRSAFDV
LMANSKKKNQPSKAKESSPRKRKTPSKPQSQTPDLLPQKEDAPAPTENQDIVQNSSSCEI
GGLKDSDSKQIQTSSNADKCLVAAKKPKLSITPEESVSELKKKAVEFKAKKAAYWGEGKR
VPFMFLAKTLEAVSKESGRIVITGIVCNMLRTVMETAPDDLLAVMYLLVNRIAPAHEGLE
LGIGESSIIKALAEACGAKETHIKKQYEELGDLGLVAKAIRTSQPLLRKPEPLTVVKVFD
TFRLIAKESGKDSQEKKKNHIKALLVATTDCEPQFLIRLLQTKLRIGLAEQTLLAALGYA
AVYSEKHSVSAKADHSLEEAAKIIKQVYSVIPVYDKIIPALLCGGVWDLHKTCSFSPGIP
VGPMLAKPTKGVSEIVEKFQGMEYTCEYKYDGERAQIHYMENGSVEIYSRNAERNTGKFP
DVVAAITRLKKPSVKSFVLDCELVAYDREKQKILPFQILSTRARKNVVMNEIKVNVCIYA
FDILYLDGQLLLQEQLNVRREHLYKSFQEEPSFFQFATAITSDDLEEIQKFLDDAVNSSS
EGLIIKTLKKDATYEPSKRSLNWLKLKKDYMDTIGDSLDLVPIAAFHGRGKRTGVYGAFL
LACYDNDKEEFQSICKIGTGFSEAMLEERSSSLRSKVIEKPKSYYRYGDTLSPDVWFEPS
EVWEVKAADLTISPVHRAAVGTVDPDKGISLRFPRLLRVREDKNPEQASSSDMVADMYNA
QKHTQKDNQDENDDV
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgttctcgttctgctcatgccgccacacctcactcctcgtctctctctctcttaacgtc
gcaacaaaactcacctcccgatcccccgtctccatctcctctaaccatttcttcaattcc
accacactaaaccctagtgcacgaacaatgtccggctcttcccgctcagcctttgatgtt
ctcatggccaattccaagaagaaaaatcaaccgtccaaggctaaagaatcatcgccacgg
aaacgcaaaaccccatctaaaccccaatcccaaacccctgatttacttccacaaaaggaa
gacgcaccagcacccactgaaaatcaagatattgtgcagaattcgagctcgtgtgaaatc
ggtggattgaaagattcagattcaaagcaaattcagactagtagtaatgcggataaatgc
ttggtggcggcgaagaagccgaagttgtcaattacgccagaggagagtgtatcggagttg
aagaaaaaggctgtagaattcaaagcgaagaaggcggcgtattggggtgaaggaaaacgg
gtgcctttcatgtttttagcaaagacgttggaggctgtctctaaggagtcaggcaggatt
gtcatcacaggcatcgtgtgtaatatgctgaggacagtgatggagacagcgccggatgat
cttttggcggttatgtaccttttggtgaataggatcgcacctgctcatgagggtttggag
cttggtattggggaatcttcgattatcaaggcacttgctgaggcttgtggggctaaagaa
acacatattaagaagcaatacgaggaacttggtgatctaggccttgtagcaaaagccata
cgtacgtcgcagcctttgttgcgtaaaccagaaccgttaaccgttgttaaagtctttgac
acattcaggctgattgccaaggaatctgggaaagatagtcaagagaagaaaaagaatcac
ataaaggcattgctagtcgcaacaactgattgcgaacctcaatttttgattcgtttgctc
cagacaaaattacgtattggtttggcagaacaaactctattggctgcattagggtatgct
gctgtatattcagagaagcattcagtttctgcgaaggctgatcattcgctcgaagaagct
gcaaaaatcatcaaacaagtttattctgtaattccagtatacgataaaatcattccggct
cttctttgtggtggtgtgtgggatctacacaagacatgtagcttttcacccggtattcct
gtcggacccatgttagctaaacctacaaaaggagtatctgaaattgtggaaaagtttcaa
ggtatggaatacacctgcgaatacaagtatgatggagaacgtgctcagatacactatatg
gagaatggctcagtagagatatacagtagaaatgcagagcggaacactggaaagtttcca
gatgttgttgctgctatcactagattgaaaaagccttctgtaaaatcatttgttcttgac
tgcgaacttgttgcatacgatcgcgagaaacagaaaatcctacctttccagatactcagc
actcgtgctcggaaaaatgttgtcatgaatgaaatcaaagtcaatgtttgcatatatgct
ttcgacattctctatcttgatggccaactactcctgcaggagcaactgaatgttcgtagg
gagcacctttacaaatcatttcaagaagaacctagttttttccagtttgctactgctata
acatcagatgatcttgaggaaatacaaaagtttctagatgatgctgttaattcaagctct
gagggtttgattatcaaaacattgaaaaaagatgctacatatgaaccttcaaaaaggtcg
cttaactggctaaaattgaagaaagactacatggacactattggtgattcattagatttg
gtccccattgctgcattccatggcaggggtaaacgtactggtgtctatggtgcctttctc
cttgcttgttatgacaatgacaaagaagaattccaaagcatatgtaaaattggaactgga
ttttctgaagctatgcttgaagaacgttcttctagtcttcgctcaaaagtgattgagaag
ccaaagtcatattacaggtatggagatacacttagtccggatgtgtggtttgaacctagt
gaggtttgggaggtcaaagcggctgatcttaccattagccccgttcaccgagctgccgtt
ggcaccgtagatcccgacaagggaatttctctgaggtttccacgtttacttcgtgtgcga
gaagataagaatccagaacaggcctcctcatctgatatggttgctgatatgtataacgca
cagaagcacacccagaaagacaaccaagatgaaaatgatgatgtttga

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