Salvia hispanica (chia): 125215011
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Entry
125215011 CDS
T09851
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
shis
Salvia hispanica (chia)
Pathway
shis04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
125215011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125215011
03029 Mitochondrial biogenesis [BR:
shis03029
]
125215011
Membrane trafficking [BR:
shis04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125215011
Atg1 complex
125215011
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125215011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
125215011
NCBI-ProteinID:
XP_047972245
LinkDB
All DBs
Position
3:51230637..51234934
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AA seq
620 aa
AA seq
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MASSHGNTHSERAKMEQIITEFFAKSLHIILESRCPYVSSRNYSGEQVLSSLSPSSSSSS
SSSFRPRDKWFNLALRDCPAALENIDFWRQSNLEPMIVDVILMQRPIDWDPLNFSPKTGF
VSGKERHYYGSDNEEFGCEGKNERIIERWVLQYESKKNGGSTGSKKRSNCTSSHALYKKS
ILLLRSLYATVRLLPAYKLFRDLTSSAHIRMYNLAHRVSSFVEPFTRREEADMQRFVFTP
VDTSCGRLCLSVLYRSSVVDMGLDPSTPISPQFIPEYVGSPMAEPLKRFPSGFVSQSSPS
SSPFGRRHSWSYDLYRASPPSANPSPSPSPTYSDSHASLAKQRCRRLPPPSLPHHVPDET
LVAYMKTPSYDEYWPSPVFSPSPSPSPPTYVPNSHISKALLRCESAPVSIPVTRLSSMPS
LPNKQLMPPSPPMKATLLSAAENIAHVRPTSTADKLLSFSKDRPHQIPGARPSVNSSPSK
SFSSRLSFQDDYDDGPFVVEDDEILDPSSRSGLFELPGHPNEPGGNLFVKRSQDAAVGAL
VRMLKKAPPLHQDLQGSTLQTPTNSIKDTTEISEEPRVQQSSASNSVSSGLGLVTSKTTA
NALEELHGYRKMKDSLLKLK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcacgggaacactcattcggagcgagccaaaatggaacagattatcacc
gagtttttcgccaaaagcctccacataattctcgaatcgcgctgcccttatgtctcctct
cgcaattacagcggggagcaggttttgtcctcgctgtctccctcctcttcttcctcgtct
tcttccagttttaggcctcgggataagtggtttaatttagcacttagggattgccctgct
gccttagagaacatagacttttggcgccagagtaaccttgagcctatgatcgttgatgtt
atactaatgcagaggcctattgattgggatcctttgaatttctccccgaaaacggggttt
gtgtcggggaaggagaggcactactatggctcggataatgaggagtttgggtgtgaaggg
aagaatgagaggattattgagagatgggttttgcaatatgagagtaagaagaatggtggc
tctactgggagtaagaagaggtcgaattgtacgagctctcatgctttgtataagaagtct
atactgttgttgaggtctctgtatgccacagttaggcttttgccagcttataagctgttt
cgggatctcacttcatcggctcatattaggatgtataatcttgcccatcgtgtttcgtct
tttgttgagccgttcacccgcagagaagaggcagatatgcagcgatttgtatttactccg
gttgacacttcttgtggcaggctttgcctctcagtattgtatcggtcatctgtagtggat
atgggtttggatccttcgactcctatatcaccgcagttcattccagaatatgttgggagt
cccatggcggaaccactgaaaaggtttccttctggttttgtatcacagagctccccatct
tcgtctccatttggaaggaggcatagttggagttatgacttgtatcgagcatccccacct
tcagctaacccctcgccttcaccttcgccaacatactccgattcccatgcctctttagca
aaacagcgctgccgtcgtctcccaccaccatccttgcctcatcatgtacctgatgaaaca
cttgtcgcttacatgaagactccaagttatgatgagtattggccttcccctgtgttttca
ccatctccatctccatcaccacccacctatgttcccaatagtcatatatctaaagctctt
ttgcggtgtgaaagtgctcctgttagcatacctgtgacaagactttctagcatgccttca
ctgccaaacaaacaattgatgcccccttcacctcccatgaaagctactctactatcagct
gctgagaacattgcacatgtgaggccaacctcaacagctgacaagttactctcgttcagc
aaggatagaccacaccagatacctggggcaagaccatcagtgaatagctcaccatctaaa
tcattttccagtaggttatcatttcaggatgattatgatgatggaccatttgttgtcgag
gatgacgaaatactcgatccaagttccaggtcaggtttgtttgagctgccaggacatccg
aatgagcccgggggtaatttatttgttaaaagatcacaagatgctgctgtcggtgctctt
gttcgtatgctgaagaaagcaccacctctccaccaagatctacagggctccacgcttcag
acaccgaccaacagtatcaaggacacaactgaaatatctgaagagccaagagtccagcag
tcttctgcttcaaatagtgtgtcatctgggcttgggctcgtgacatccaagactacagct
aatgctctggaggagctccatggctacagaaaaatgaaagattcgttgcttaaattgaag
taa
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