Salvia hispanica (chia): 125215015
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Entry
125215015 CDS
T09851
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125215015
Enzymes [BR:
shis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125215015
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125215015
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
125215015
NCBI-ProteinID:
XP_047972250
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Position
3:complement(53662069..53668674)
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AA seq
615 aa
AA seq
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MNRMKIVTYNVNGLRPRISQFGSLRKLLDSFDADIICFQETKLSRQEFRADLVQAEGYES
FFSCTRTTEKGRTGYSGVATFCRVNSVFSSNEVSLPVSAEEGFTGVLKDFSVSGYKKVEY
SPLIEGLEDFSADELLKIDGEGRCIITDHEHFVLFNIYGPRAVADDTERIQFKHNFFNIL
QKRWESLLHQGRRIFVVGDLNISPFAIDCCDAGPDFEKNKFKSWFRSLLVDNGGAFFDVF
REKHPQRREAYTCWPTNSGAEEFNFGTRIDHILGAGPCLHKEETQGHSLVACHVKECDIL
DQFKRWKPGSTPRHKEQKTRNGKMEGSDHAPVYVSLVDIPNAQQHSTPSLSTRYCPQVYG
CQQTLVSMFARRQSAEDSNLSGGSNFISDDGNVVEKCSQLNKRTLHSCSSASSDFIHQGI
LCTSDYSNNDSFNEPSSGAQTFSASGHTKSSVICKKKARKSQSSQLSLKSFFKKTVGGCS
ESTSFCSNKELTQEDFSIGEPSETFLEGCEHNEVKELQEKATKQCGLVQDDMSQAAEKKN
NNALVEWQRIQQLMQTSIPLCKGHKEPCVSRVVKKPGPTLGQRFYACARAEGPASNPEAN
CGFFKWATAKSKKKR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaatgaagatagtgacctacaacgtgaacggcctgagacctcgaatctcacag
ttcggctctcttcgcaaattgctcgattcctttgatgccgacatcatctgctttcaggaa
acgaagttgtcgaggcaagagtttagagctgatttggtgcaggctgagggttacgagtcc
tttttctcttgcactcgcactactgagaaaggccgaactggatattctggtgtggcgaca
ttttgccgtgtcaactctgtgttttcgagtaatgaggtatctttgccagtttctgccgag
gagggctttactggtgttcttaaggatttctcagtttcggggtacaaaaaagttgaatat
tcaccactaatcgaagggctagaagatttttctgctgacgagcttctgaaaattgatggt
gaaggacgttgtataataactgaccatgaacattttgttcttttcaatatatatggacct
agagctgtagctgatgatacagaaagaatccaattcaagcataactttttcaacatactg
cagaaaaggtgggaatctcttctacatcagggacggagaatatttgttgttggggacctc
aatatttccccctttgcaatagattgttgtgatgctgggcccgatttcgagaaaaataag
tttaaatcttggtttagatctttgttggtggataatggaggtgcattttttgatgttttc
cgggaaaaacatcctcagagaagagaagcctacacctgctggccgacaaatagtggggca
gaggagttcaactttgggacacgtattgatcacattcttggtgctgggccatgcttacat
aaggaagaaactcaaggacatagcctcgtagcttgccatgttaaagagtgcgacatatta
gatcagttcaaacgttggaaacctggtagtacacccaggcataaagaacaaaagacaaga
aatggtaaaatggagggctcggatcatgctcctgtctatgtgagcttggtagatatcccc
aatgctcaacaacacagtactccgtcactgtctactagatattgtccccaggtctatgga
tgtcagcagacactagtgtcgatgtttgcaagaaggcaatccgcagaagatagtaactta
tctggaggatccaattttatttcagatgatggtaatgtcgtcgaaaaatgcagtcaactc
aataaaagaactctgcattcatgtagctcagcttcatcagacttcatccatcaaggcata
ctttgcacatcagattacagtaataatgactcatttaatgaaccatcttctggtgctcaa
accttctcagcatctggtcatactaaatcctcagtgatttgcaagaaaaaagcaaggaag
agtcaatcatctcaactttcactaaaatcatttttcaagaaaacagtaggtggctgtagt
gagtcaaccagcttttgttctaataaggagcttactcaagaagatttctccattggtgaa
ccgagtgaaacttttcttgaaggttgtgaacataatgaagtgaaggaattgcaggaaaaa
gccacaaaacaatgtggattagtgcaagatgatatgtcccaagctgctgaaaagaagaat
aataatgctctagttgaatggcaaaggattcaacaacttatgcaaactagcatacctctt
tgcaagggccacaaggaaccttgtgtctcccgtgtggtgaagaaaccagggcctacttta
gggcaacgattttatgcctgcgcacgtgcagagggacctgcatctaatccagaagcaaac
tgtggattctttaaatgggctactgcaaagtctaagaagaaaagatga
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