Salvia hispanica (chia): 125215059
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Entry
125215059 CDS
T09851
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125215059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125215059
04147 Exosome [BR:
shis04147
]
125215059
04090 CD molecules [BR:
shis04090
]
125215059
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125215059
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125215059
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125215059
CD molecules [BR:
shis04090
]
Proteins
125215059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_25
AAA_30
DUF815
AAA_24
AAA_7
Motif
Other DBs
NCBI-GeneID:
125215059
NCBI-ProteinID:
XP_047972318
LinkDB
All DBs
Position
3:5757529..5762554
Genome browser
AA seq
1262 aa
AA seq
DB search
MQASTSESHENGAEGYGSKEKTEEHAVPFHKLFAFADSFDKLLMIVGSIGAIGNGVSMPL
MTVLFGELVDSFGQNQTNNVVSVVSKVALKFVYLALGCGAAAFLQVSGWMITGERQAARI
RSLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFIQLVATFVGGFVI
AFIKGWLLTLVMLSSIPLLVISGGVMSVVLSKMASRGQSAYAKAANVVEQTIGSIRTVAS
FTGEKRAVAQYEKSLIEAYSSGVQEGLATGLGFGSAMFIIFCSYALAVWFGAKMILEKGY
TGGEVLNVIVAVLTGSMSLGQASPCMTAFAAGRAAAYKMFETINRKPEIDAYDSRGKKLQ
DVRGDIELRDVYFSYPARPDEQIFRGFSLFIPSGTTAALVGQSGSGKSTVVSLIERFYDP
QSGQVLIDGINLKELQLKWIRSKIGLVSQEPVLFTGSIMDNIAYGKEGATKEEIRVAAEL
ANAAKFIDKLPQGLDSMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESE
RVVQEALDRIMVNRTTVIVAHRLSTVRNAHMIAVIHQGKMVEKGTHDQLLEDPEGAYSQL
IRLQESNKDSDNVDDNEREASMGSGRQSSRKMSFIRSISRGGSSEIGHSSRRQSFGPPPA
INPSLEEGGSSSEKPPNVSIHRLAYLNKPEVPVLILGTISAIINGAVMPIFGILISSVIK
TFFETAPKLRKDSKLWSLVFVGLGVVSLVAYPARTYLFGVAGNKLIKRIRLMCFEKAVRM
EVSWYDEPEHSSGMIGARLSSDAASVRALVGDALAQMVQDLSSAIVGLGIAFQASWQLAL
IILAMIPLIGLSGVVQIKFMKGFSADAKAMYEEASQVANDAVGSIRTVASFCAEEKVMEM
YRVKCEGPMKNGIKQGVISGIGFGLSFALLFLVYATSFYAGARLVQDGKITFSDVFRVFF
ALTMAAIAISQSSSLAPDSTKAKGAAASVFAILDRESKIDPSDESGEKLENMKGEIELRH
VSFKYPTRPDVQILRDLSLTIRCGKTVALVGESGSGKSTVISLLQRFYDPDSGHISIDGV
EIQKFQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISG
LANGYDTMVGERGVQLSGGQKQRVAIARAIIKAPKILLLDEATSALDAESERVVQDALDR
VMVNRTTVVVAHRLSTIKGANVIAVVKNGVIVEKGKHETLININDGFYASLVALHTSAAD
AS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatccacatcggagagccatgaaaatggtgcagaaggatacgggagcaaagag
aaaacggaggagcacgctgtcccgtttcacaagctgtttgcctttgctgattccttcgac
aaactgctcatgattgtcggttccattggcgccattggcaacggggtttccatgcctctc
atgacagtcctctttggggagcttgtcgattccttcggccaaaaccagaccaacaacgtt
gtttctgttgtttctaaggtagcattgaagtttgtgtatttggctttggggtgtggcgct
gcggcgtttctgcaggtgagtggttggatgatcactggggaaaggcaagcagcaagaatt
aggagtttgtatctgaaaacaatcttgaggcaggatgttgctttcttcgataaggaaacc
aacaccggggaagttgtggggcgaatgtctggcgacacagttctcattcaagatgccatg
ggggagaaggttgggaaattcatacagctggtggctacatttgttggtggctttgtgatt
gcattcataaaaggatggcttctcactttggtcatgctgtcatccattcccttgcttgtg
atctccggtggtgtcatgtccgttgtcttgtctaagatggcgtctcgtggccagagcgct
tatgctaaggccgcgaatgtggtggagcagacgattggctccattaggacggtggcgtcg
tttactggcgaaaagcgggctgtggctcagtacgagaagtccctgattgaggcttatagt
tcaggggtgcaggaaggattggctactggattaggctttgggtctgctatgttcatcata
ttctgcagctatgctctggctgtttggtttggtgcaaagatgatattggagaaaggttac
accggtggcgaggtgctcaacgtgatcgtcgcagtgctgactggttcaatgtctctgggg
caggcgtccccgtgcatgactgcctttgcagcgggccgagcagcggcttacaagatgttc
gagactattaacaggaagccggagatagacgcgtatgacagcagggggaagaagctccaa
gacgttcgcggggatatagagctacgtgatgtttatttcagctaccctgcacggccggat
gaacagatattccgaggcttctcactcttcatccctagtgggacgacggctgctctagtt
gggcagagtgggagtggaaaatcgacagttgtgagcttgatagagaggttctacgacccc
caaagcggccaagtgctgatcgatggaataaatcttaaggagctccaactcaagtggatt
aggtcgaagatcggccttgtgagccaagaaccggtgctattcacaggtagcatcatggat
aacatcgcgtatgggaaggagggcgcgactaaagaggaaatccgagtggctgcagagcta
gcgaatgctgctaaattcattgataagttgcctcaggggctggatagcatggttggtgag
cacggcactcagctttccggaggccagaagcagagaatcgccattgctagagcgatccta
aaggacccgaggattctactgttagatgaggctacaagtgcactagatgcagagtctgag
agagtcgtgcaagaggcgttggaccggattatggtgaacagaaccacagttatcgtggcc
catcgcctcagcacggtcaggaatgctcatatgattgcagtcattcatcaaggaaagatg
gttgagaaaggtacacatgatcaactgctggaggatccagaaggggcgtattctcagctg
attcgcttgcaagaatccaacaaggactcggacaacgttgatgacaacgaaagagaggcg
agcatgggctctggtcgacagtcaagccggaagatgtcattcatccgctccattagcaga
ggaggctcctccgagatagggcacagcagtcggcgtcagtcatttggtccgcctccggca
atcaacccctctttggaagaaggtggtagttcctctgagaagccacccaacgtatccatt
catcgccttgcctatctaaataagcccgaggtaccggtgctgatattgggaaccatatct
gcaattattaatggtgcagtgatgcctatatttgggatcttaatatcaagtgtgatcaag
actttctttgagacggcacctaagctacggaaggactcaaagttgtggtcgttggtgttc
gtggggctaggggttgtttcactagtggcgtatccagccaggacctatctgtttggggtg
gccgggaacaagctgatcaagaggattaggctcatgtgcttcgagaaggcggttaggatg
gaggtttcttggtatgatgagcctgagcactcaagtggtatgatcggagcaaggctgtca
tctgatgctgctagtgtccgtgctctagtaggcgacgcgctagcccaaatggttcaagac
ttgtcctcggctattgtgggactaggcattgcttttcaagcaagttggcagttggcacta
atcatacttgctatgatacctctcataggactcagtggagttgtgcagatcaagttcatg
aagggcttcagcgcagatgcgaaggccatgtacgaagaagccagccaggttgcaaatgac
gcagttggaagtatacgcaccgttgcttccttctgcgcagaagaaaaggtgatggaaatg
tacagagtgaagtgcgaggggccaatgaagaatgggattaaacaaggggttattagtggc
atcgggtttgggttgtcgttcgccttgctgtttctcgtctatgccacgagcttctacgct
ggagcacgccttgttcaggatggcaagatcacattctctgatgtgtttcgtgttttcttt
gctctaacaatggcggctatcgcgatctcccagtcgagctcgttggctccggactcaacc
aaggccaagggcgcagctgcctcagtgtttgcgattcttgatagagagtcgaagatcgat
ccaagcgatgaatccggtgagaagctagagaatatgaagggagagatagagctgaggcat
gtgagtttcaaatatccaacaaggccagatgttcagatcctgcgtgacctctccctcacc
atacgttgtggcaagactgtcgcgttggtcggggagagcgggagcggtaaatcaacggtc
atctcgttgttgcagagattctacgatcctgattccggccatataagcatcgacggagtt
gagatacaaaagttccagctcaagtggctgaggcagcagatggggctagtgagccaagag
cctgtcttgttcaacgacacgatccgggccaacatcgcctacgggaagggaggcgatgca
acagaggcagagatcattgctgcagcggagctagccaacgcccacaagttcatcagcggg
ctggccaacgggtacgacacgatggtgggggagcgaggggtccagctctccggagggcag
aagcagcgcgttgccattgcgcgtgccatcatcaaggctccaaagatactgctgctcgac
gaggccacgagcgcattggacgcagagtcggagagagtggtccaggatgcgctcgaccgg
gttatggtgaaccggaccacagtcgtcgtggcacataggctgtcgaccatcaaaggagcc
aatgtgatcgctgtggtgaagaatggggtgatagtggagaaaggaaagcatgaaacactg
atcaacatcaacgatggcttctacgcttcattagttgcgcttcatacctcagctgctgat
gcttcctaa
DBGET
integrated database retrieval system
