Salvia hispanica (chia): 125215112
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Entry
125215112 CDS
T09851
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125215112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125215112
Enzymes [BR:
shis01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
125215112
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
90S particles
Other 90S particles
125215112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
125215112
NCBI-ProteinID:
XP_047972390
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All DBs
Position
3:complement(51059770..51062258)
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AA seq
273 aa
AA seq
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MGRAYKMKGQKRKNKDEKYDREQSVEMAEPSKRVKTDASDSEKEENLVADMPGIPIAPLD
TGSNKQRVIFVLEKASLEIAKVGKTYQLLSSDEHATFLAKNKRNPADYRPDIAFQAIQTI
LDSRVNKSGRLKALYVRTQQGLLLEIKPHARLPRTYKRFSGLMVQLLQKLHITATGNGEK
LLRLVKNPVTQYLPTNSRKIGFSHSSEKLIDMHNYVGKINEELDLVFVLGAMSHGKIDED
YVEDYISISEYPLSAAYAISIITNAVERKFNIL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggcatacaaaatgaaagggcagaagaggaagaacaaagatgagaaatacgat
agagagcaatcagtcgaaatggcggagccgtcgaagagagtgaagacagacgcctcggac
tctgaaaaggaggaaaatttggttgctgatatgcccgggattccgattgctccactggat
acgggaagtaacaagcagcgagtcatctttgttctcgagaaggcctctttggagattgcc
aaagttggaaagacttatcagctattgagttccgacgagcatgccacctttttggcgaag
aataagcggaaccccgccgattatcgccccgatattgcttttcaggcaatccaaacaatt
ttagatagtcgcgtgaacaaaagtgggagactgaaggctctgtatgtaaggacacaacaa
ggtcttctattggagatcaagccccacgcgcgtctgccaagaacatataagaggttctcc
ggtctcatggtacaattgttgcaaaagctgcacattactgcaactggcaatggtgaaaag
cttttacgccttgtgaagaaccctgtgacccagtatctacccaccaacagccgtaaaata
ggcttctctcatagttcggaaaagttgattgacatgcacaactatgttggtaaaatcaac
gaagaattggatttagtatttgtgttaggagcaatgtcccatggaaaaattgatgaagat
tatgttgaagattatatttcaatctccgaatatccattgagtgctgcatatgccatttcg
attattacaaatgctgtagagcgaaaattcaatatcttgtaa
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