Salvia hispanica (chia): 125215188
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Entry
125215188 CDS
T09851
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125215188
03036 Chromosome and associated proteins [BR:
shis03036
]
125215188
Transcription factors [BR:
shis03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125215188
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125215188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
125215188
NCBI-ProteinID:
XP_047972486
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All DBs
Position
3:45496258..45502708
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AA seq
644 aa
AA seq
DB search
MADGHSFNNISLGGRGGTNPGQLKVHSGGIIWKKQGGGKAVDVDKSDLLGLTWMKVPRSN
QLGVQTKDGLNYKFTGFRDQDVASLNTFFQTNFSVTPEEKQLSVSGKNWGEVDLNGNTLT
FLVGNKQAFEISLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPSAQVFRDKIVSMADVGAGGEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRVFWLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDAIMDTTLSMS
EDLYNSKYKEKLDPDHKGLIHEVFITILRGLSGAKVTKPGKFRSSQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHTAGGSNMHYFDFLIRLKTEQEHLFRNIQ
RNEYHNLFQFVQEKGLKIMNFNAGSVPNAEGVAAVLQSDIDDAVDPHLERIRNQAIGDES
DEEDEDFVIDKDDGGSPTDDSGGDDSDASDSGGEKEATPKKKPKKEPSAVKASSSRKKTK
DDDDDGKKKKQKKKKDPNAPKKAMSSFMFFSQAEREDVKKTNPGIAFTEVGKVLGERWNK
MTAEEKAPYEAKARADKKRYGDEISGYKNPQPMEVDSPDGSDTS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtcattcgttcaacaatatctctctcggtggtcgaggaggaactaatcct
ggacaacttaaagtccactcaggtgggataatatggaagaaacaaggaggtggcaaggct
gtggatgttgataaatcagatttgctgggccttacatggatgaaggtacctcgatctaac
caacttggagttcaaaccaaagatggcctcaactacaagttcaccggtttccgggatcag
gatgttgcgagcctgaatacattcttccagaccaacttttcagtaactccagaggagaag
cagctctctgtcagtggaaaaaattggggagaagttgatttaaatgggaatacacttact
tttcttgtgggtaataagcaagcattcgagatatctctagccgatgtagcacaaacccaa
cttcaagggaaaaatgatgtcatgctggaattccatgttgatgatacaactggtgccaat
gagaaagactcattaatggaaataagtttccacatccctaattcaaacactcaatttgtt
ggtgatgaaaatcgaccttctgctcaggtattcagagacaagattgtctcaatggcagat
gttggagcaggaggggaagaagctgttgttacatttgacgggattgccatacttactcct
aggggacgatacagtgtcgaacttcatctttcctttttacgtctccaaggacaggctaat
gactttaaaattcagtacagcagcgtagttcgtgttttttggttacctaagttcaaccaa
ccacacacctttgttgtcgtgacacttgatccaccaattaggaagggccaaaccttgtat
ccacatattgtgatgcagtttgagactgatgctattatggacaccactttatcaatgagt
gaagacctttacaattccaagtacaaagaaaagcttgaccctgatcacaagggactcatc
catgaggtcttcattactatactgcgtggattgtctggtgccaaagtcaccaaaccagga
aaattccgcagtagtcaggatggttatgctgtcaagtcatcactcaaagctgaagatggg
gttctctatcctcttgaaaagagctttttctttttacctaagccacccactctaattctt
catgaggagattgactatgtggagtttgagaggcatactgctggaggttcaaacatgcat
tattttgattttctcatcagacttaagactgagcaggagcatcttttcagaaatattcaa
agaaatgagtatcacaatctctttcaatttgtccaagagaaaggtttgaagattatgaat
ttcaatgcgggaagtgtcccaaatgccgaaggagttgcagctgttttgcagagtgatatt
gatgatgctgttgatccacatctcgagagaatcaggaaccaagcaattggagatgagagt
gatgaggaggatgaagattttgttattgataaagacgatggtggctcccccactgatgac
tccgggggagatgactctgatgctagtgatagcggaggggagaaagaggcaacaccgaaa
aagaagcccaagaaggaaccttctgctgtgaaggcgtcatctagtaggaaaaagactaaa
gatgatgatgatgatggaaagaagaagaaacaaaagaagaaaaaggatccaaatgccccc
aagaaagcaatgagttccttcatgttcttttctcaagccgaaagagaggatgtgaagaag
actaatccaggaattgcgtttacagaagtaggaaaagtactaggagaaagatggaataag
atgactgcggaggagaaggctccatatgaagcaaaagcccgagctgacaagaaacgctac
ggtgatgagatcagtggctataagaatccacagccgatggaagttgactcaccagatgga
tctgacacctcttag
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