Salvia hispanica (chia): 125215255
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Entry
125215255 CDS
T09851
Name
(RefSeq) retinoblastoma-related protein-like
KO
K04681
retinoblastoma-like protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125215255
Transcription factors [BR:
shis03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
125215255
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
125215255
NCBI-ProteinID:
XP_047972577
LinkDB
All DBs
Position
3:31325330..31331774
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AA seq
1007 aa
AA seq
DB search
MAELKMIPSPNRDRDGGGTTIEARFAHFCKDDLALDDGDFLEQAMKLFGQSKSLLLANVS
AIGTGTLDEAERYWFSFVLYSVRRLSENVGPKEKGLNLCQILRAAKLNIIEFYKELHQYL
IKVGSILSNLFGEDWEKRLEAKESHTNFVHLTLLRKKYERAFRDLFSIVDADDSKQLNVA
NVSGHGSDYYRFGWLLFLALRVHVFRLCKDLVSCTHGLVSVLAILLIHIPARYRNFNLND
SDRIVMKGDKADLLASLCNMYDTSEDVLRQTLDKANNLITDILKKNHRLASDCTPENLEN
IVTDGLIYFDDLMDESSLPSSVNLLEKDYDSATRDMDGLDERIFINDNDSLLVSGSLSAL
NMSGSGTKRKIDTMSSPTKTISSPLSPYRSPVRHSNGYAGGGMSKMAATPVSTAMTTAKW
LCSVIAPLPSKPSAELERFLQSCDRDVSADVTRRAQVILEAIFPSSGPGQNATLMDNIWA
EQRRIEAMKLYFRVLQALCMAESQILHVNNLTSLLTSERFHRCMLACSAELVLATHKTVT
MLFPTVLERTGITAFDLSKVIESFIRHEETLPRELRRHLNSLEERLLESMVWEKGSSMYN
SLIVAKPALSAEITRLGFLAEPMPSLDAIAMHINMSSGVLAPTQKHDKIGQNVDIRSPKR
VCTEYRSVLVERNSFTSPVKDRLLALNNLKSKFPAPILHSAFASPTRPNPGGGGETCAET
AVNVFFSKIVKLAAVRINGMVERLQLSQQIRESVYCLFQKILGQRTTLFFSRHIDQIILC
CFYGVAKISQLNLTFKEIIFNYKKQPQCKPQVFRSVYVDWKAPRRTGKTGPDHVDIITFY
NEIFIPAVKPLLVELAPGGSEQGGSHASEAKNNIDGAFPAPASPKPSSFPSLPDMSPKKV
SAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINDRLNGTRKLRV
ALKFNEEEGGLVRGTGLVTDSVVADSLCIQNGKRVLTPVKSEQQPEL
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctgaagatgattccgagccctaatcgtgatcgagatggaggtggaaccacc
attgaagctcggtttgcacacttctgcaaggatgatctggccttagatgatggcgacttt
ctggagcaagccatgaagttatttggtcaaagcaagagtctactgttagctaatgtatct
gccattggaactgggacgctggatgaagcggaaaggtattggttttcatttgtcctctat
tcagttagaaggctcagcgaaaatgttggccccaaggagaagggtctcaatttatgccag
atactgagagcagcaaagctcaacattattgaattttataaagaacttcatcaatatcta
atcaaggtcggatcaattttgagtaacctgtttggtgaggattgggagaagaggcttgag
gcaaaggaatcacacacaaactttgtgcatttgaccctattgagaaagaaatatgagcgt
gcatttagggatcttttctctatagttgatgctgatgatagcaaacaattaaatgtggca
aatgtatctggtcatggatcagattactaccgatttggatggttactctttctggccctt
cgtgtacatgtgttccgtctctgcaaagacttggtatcatgtactcatggcctggtttct
gtcctggcaatactcttaatacacattcctgctcgctacagaaacttcaatcttaatgat
tctgaccgcatagttatgaaaggcgacaaggctgatctccttgcatcactttgcaatatg
tacgacacttcagaagatgttctgaggcaaactttggataaagcaaacaacttgataact
gatatattgaagaaaaaccatcgtttggcttctgattgtacgcctgagaacttggaaaat
attgttacagatggtttaatctattttgacgatttgatggatgaatcttctttaccatca
agtgtgaacttgctggagaaggattacgattctgcaactcgagatatggatggattagat
gagcggatttttataaatgacaatgatagcttgctagtttcgggcagcttaagtgcttta
aacatgagtggatctgggacaaagaggaaaattgacacaatgtcctccccaacaaagaca
atttcaagtccattgtccccttaccgatctcctgtacgccattccaatggttatgctggt
ggtggcatgtccaagatggctgctactccagtcagcacagcaatgacaactgcaaaatgg
ctatgttctgttattgctccactcccatctaaaccttcagcagagctagagagattcctt
caatcatgcgacagagatgtgagtgctgatgtcactaggagggctcaggtaatacttgaa
gccatatttccaagtagtggacctgggcaaaatgcgaccttgatggacaacatatgggct
gaacaacgtcgaatcgaagcaatgaagctttatttcagggttctccaagcactgtgcatg
gctgagtcccagattctgcatgtgaacaatttaacttctttgctgaccagtgagagattt
cacagatgtatgctagcatgttcggctgagcttgttcttgctacacacaaaactgtaaca
atgttgtttccaactgttttggagagaacaggaataacggcctttgatcttagtaaggtg
atagagagcttcatcagacatgaagaaactcttcccagggaacttagaaggcatttaaat
tctcttgaagaacgactattagagagcatggtttgggaaaaaggctcatcgatgtacaac
tccttgattgttgcaaagccagccctttctgcagaaataactcgtcttggctttttagct
gaacctatgccgtctttggatgcaattgccatgcacattaacatgtcaagtggtgtctta
gcccccacacaaaagcatgacaaaatcggtcaaaatgtagatattcgttcaccaaaaaga
gtgtgcactgagtaccgaagcgtattagttgaacggaactcattcacatcgccagtcaaa
gatcgcctcttggccctaaacaacttgaaatctaagtttccagctcctattttacattct
gcattcgccagtcctacaagaccgaatccaggtggtggaggagaaacatgtgctgaaaca
gcagtcaatgttttcttcagtaagattgtgaagctagcagctgtcagaattaatgggatg
gttgaaagactacagctttcacagcagataagagagtctgtctactgccttttccaaaag
atcctcggccagcggacaacactgttcttcagccgacacattgatcaaattatcctttgc
tgcttctatggagttgctaagatttcccaactgaacctgaccttcaaagaaatcattttt
aactataaaaagcaacctcagtgcaaaccccaagttttccggagtgtctatgttgattgg
aaagctcctcgccgaactgggaaaacaggccctgatcatgttgatatcataacattttac
aatgagatattcattcctgcggtaaaacctcttctggttgagcttgctcctggtggatct
gaacagggtggttctcatgcttcggaagccaagaataacattgatggtgcatttccagca
ccagcatcacctaaaccatcctcatttccaagccttcccgacatgtcacctaagaaagta
tcggcggctcacaatgtttacgtctccccattgcgatcatcaaagatggatgcattaata
tcacatagctcaaaaagctactatgcttgcgtgggagaaagcacgcacgcgtaccagagc
ccttcgaaagacctgactgctatcaacgatcgcctgaacggaactaggaagctgagagtt
gctctcaagttcaacgaagaggagggcggattggtgagagggacggggctggtgacggac
tctgtggttgccgacagcctgtgcatccagaacggtaagcgtgtgttgacgccggtgaaa
tccgagcagcagccggagttgtaa
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