Salvia hispanica (chia): 125215271
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Entry
125215271 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125215271
04120 Ubiquitin mediated proteolysis
125215271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shis03110
]
125215271
04131 Membrane trafficking [BR:
shis04131
]
125215271
04121 Ubiquitin system [BR:
shis04121
]
125215271
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125215271
Chaperones and folding catalysts [BR:
shis03110
]
Other chaperones and cochaperones
Others
125215271
Membrane trafficking [BR:
shis04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125215271
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
U-box type E3
125215271
Multi subunit type E3
STUB1-CHIC2 complex
125215271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
TPR_8
ANAPC3
TPR_9
zf-NOSIP
TPR_14
BRO1
TPR_BSK1_C
Terminase_2
Motif
Other DBs
NCBI-GeneID:
125215271
NCBI-ProteinID:
XP_047972598
LinkDB
All DBs
Position
3:29296995..29300274
Genome browser
AA seq
272 aa
AA seq
DB search
MSPTMAAKQAEQLRQDGNTYFKKDRLGAAIDAYTEAIALCPDVAVYWTNRALCHRKRNDW
TRVEEDCRRAIQLDHYSVKAHYMLGLALLQKKEYAKGVIELDKALDLGRGANPQGYMVEE
IWQELAKAKYLLWEQESTKRSWELRNLKEACEEALSNASEKDGFVDETHLSALDQIKALN
LVFEKATENDTPTEVPDYLCCKITLDILRDPVITPSGVTYERGVILDHLQKVGRFDPITR
ETLHPSQLVPNLAIKEAVRAYLEAHGWAYRMD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaacaatggccgcgaaacaagccgagcagctgaggcaagacggcaacacgtac
ttcaagaaggatcggttaggcgccgccattgatgcttataccgaggcgattgcgctgtgc
cccgatgtggcggtgtattggaccaatcgagctctctgtcatcgcaagaggaatgactgg
acgcgtgtggaggaggattgcaggagagcgattcagctcgatcactattctgtaaaggca
cactatatgctcggtcttgctctgctgcaaaagaaagaatatgcaaaaggagtgattgag
ttggataaggcgctggatcttggcaggggtgcaaacccccaaggatacatggtagaggaa
atatggcaagagctcgcgaaggcaaaatacttgttatgggaacaagagtccaccaagcga
tcttgggagcttcggaacttaaaagaagcttgtgaagaagccctaagcaatgcttctgaa
aaagatggtttcgtcgatgaaactcacctctctgctttagatcaaatcaaagccttgaac
ctagtatttgagaaagctacagagaatgataccccaacggaggtgccagactacctctgt
tgtaaaatcactctggatattttgcgtgaccctgtgatcactccgagtggggtgacatac
gaaagaggagtgatcctcgatcacctccagaaggtgggtagatttgaccccattacccgt
gaaacgctgcatccgtctcagttggtaccgaatttggccataaaagaagccgtgcgagca
tatctggaggcgcacggctgggcctaccggatggactga
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