Salvia hispanica (chia): 125215275
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Entry
125215275 CDS
T09851
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
shis01001
]
125215275
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125215275
Enzymes [BR:
shis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125215275
Protein kinases [BR:
shis01001
]
Serine/threonine kinases: Other
Other
125215275
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125215275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
LisH
Motif
Other DBs
NCBI-GeneID:
125215275
NCBI-ProteinID:
XP_047972604
LinkDB
All DBs
Position
3:complement(3283627..3292631)
Genome browser
AA seq
1849 aa
AA seq
DB search
MEAPTEAEPQAQPEAEGVEERQEEDESDLLIAKAQSLMDKIIARRENSNPDLLHALATIL
ETQESSYMEGADQSSTSNGRSSHNIGRLGNLIRENDEFFELITSEFLAEGRGLPLQAATT
RLLYSCSLTWMYPHVFEDNVLANLRGWVMEEIPRSSGDDRQGKHDTGKRNSSDFEMLQTY
STALLAVCLPCFGALVEDVLTSGISAKLMRYLRVRVLGDTSTNQKDGNISAGNKSAPTIT
FPKMKEEGRSRLRLATEASHLDADTSRMHSDKDHDRDASLLDECGIDESSPDSMVLEVDG
YEPETDGEEKCNIRDFRESKTKLCGRSHREEDVEENMRDDSSRRKTNHGISRTRGKVRSS
EGVSETEQAMISPTSGSRSGQARSGARSQDLRRFSDSKKSLGRNYVDTFIPQRDDNDDCF
QNCKVGNKDITDLVKKAVRAAEAEARAANAPAEAIQAAGDDAAEVVKTAALEEYKKTSDE
EAAVLAASRAASTVIDAGNAVPALRNSSNGDSDSGDSKATDADLSENISEVSIPDNHSLA
KLREKFCIQCLVVLGEYVEVLGPMLHEKGVDVSLALIQRSLKHKEASTGMRLLPDILKLI
CALAAHRKFAALFVDRGGMQRLLAVPRIALTYLGLSSCLLTIGSTQGIMERVCALPSDVI
SQIVELALQLIECSQDHQARKNAASFLAATFVFRAIIDAFDSHDGLQRLMSLLRDAASVR
SGVSTGQASNSGSLQNDRSTADVLTSSEKNIASLICITLRQYFRAHFLLLVDSVRPMKNI
RSAPRNISRAANKPLDISNEAMDAVFRQIQKDRKLGPALAKARWPVVDKFLLSNGHTIML
ELCQAPPVERYLRELLQYALGVLQIVTLVPYSRKPILNATLSNDRVGIAVILDAANGAGY
VEPEIVEPALNLLINLVCPPPSISNKPSSNMQGQQAYSSQTGNGSAVVPSEKNAERNIME
RAVNVPVQNELRERNGEPASVDRGGSVAPSPSSVASGLVGDRRISLGAGAGGAGLAAQLE
QCYRQAREAVRANNGIKVLLQLLQPRMVTSPAALDCLRALTCRVLLGLARDDTIAHILTK
LQIGKKLSELIRDSGGQSAGGEQNRWQAELAQVTFELIGVVTNSGRASTLAASDAATPTL
RRIERAAIAAATPISYHSRELLLLMHEHLQASGLAESAATLLKEAKLTPLPSLAAPSSLA
HQATGQEASAIQIQWPSARAVCGFLSDKSKNSHHREDSSFRSDSTYMSSKKKKFQSSASH
SRSKVPPKTEDSPVVSSSKINFNLEQASLAADGVGTPLLSVPKFGGDADPQVRTPIVLPM
KRKLTDLKESVLGSSAKRPNTGEQSLRSPCFTTPNTSRRGGLYSDATLFCTPISTPREYQ
SRDIDENQLTGLASSSQLLSDPQPSGSERLTLDSLVVQYLKHQHRQCSAPITTLPPLSLL
QPHVCPEPKRSLDAPSNITSRLSNREFRSKHGAHHGLRKDRQFVYSRFRPWRSCRDDTSS
LLTCIAFLGDSSRIAAGGHTGDLKVFDSNSNIVLDSCTSHQSPLTLLQSHFSGDNQLILS
SSSMDVRLWDASLVSAGPKHSFDGIKAAKFSNSGGTFAALRSDSPRREILLYDIHTCQLD
LTLSDTSTNVSGRGHAYSLPHFSPSDSMLLWNGVLWDRRVSGPIHRFDLFTDYGGGGFHP
AGNEVIINSEVWDLRKFRLLRSVPSLDQTTITFNASGDVIYGILRRNLEDVTSAFNTRRV
KHPLFSAFRTVDAVNYSDIATIPVDRCVLDFATDPTDSFVGLITLDDQDEMYSSARVCEI
GRRKPTDDDSDPDDAESDEEDEDDEVFFWNRMIVSSHNKGDLVITFYLF
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcctacggaagctgagccacaagctcagccggaggcggagggggttgaggag
cggcaggaggaggatgagagcgaccttttgattgccaaggcacagtctttgatggataag
atcattgcgcgccgtgagaattccaaccccgacttgctccatgccctcgccaccattctg
gagactcaggaatccagctacatggaaggcgcagatcaatcttcaacaagtaatggcagg
tcttctcataatattgggcgacttggaaatcttattcgggagaacgatgaattttttgag
ttgataacttccgaatttctggctgaaggaagaggtttaccgttacaggcagctactaca
aggcttctttacagttgttcactaacttggatgtatccacatgtatttgaagataacgtc
ctagctaacttaagagggtgggtgatggaggagattcctcgctcatctggtgatgaccgt
caggggaagcatgacacggggaaaagaaattcgtcagattttgaaatgttacaaacatac
tctactgctcttcttgctgtatgcttgccctgttttggtgcacttgtggaagatgtctta
acatctgggatatcagctaagctaatgcgatatttacgagttcgagttttaggtgataca
agcacaaatcagaaagatggcaacatatcagcaggcaacaaaagtgcaccaaccatcacc
ttccctaaaatgaaagaggaaggtaggagtaggttgcggctagcgacagaggcttctcac
ttggatgcagacacttcaagaatgcatagtgataaggatcatgatcgagatgcttctcta
ttggatgaatgtgggattgatgagtcgtcccctgatagtatggttcttgaggttgatggt
tatgaaccagaaacagacggcgaagaaaaatgcaatattagagattttcgcgagtcaaaa
acaaaactttgtggaagatctcatagggaagaagatgttgaagaaaatatgagagatgac
tcttccagacgaaaaaccaatcatggaatttccagaacacgaggaaaggttaggtcaagc
gaaggagtatctgagactgagcaagctatgatctccccaacttctggcagtaggtcaggg
caggcacggagtggagctagaagtcaggatctaagaagattttcagactctaaaaagagt
ctaggaagaaattatgttgatacttttatccctcagagagacgacaatgatgattgcttc
cagaactgcaaagttggaaacaaagacattaccgatttggttaaaaaagctgtaagagcc
gctgaagctgaagcaagagcagccaatgctcctgctgaagccatacaggctgctggtgat
gatgctgctgaagtggttaaaactgctgctttggaggagtataagaagacaagtgatgaa
gaggctgctgtgcttgctgcttctagagctgcctctactgtcatagatgctggtaatgca
gttcctgctctgagaaattcaagcaatggtgatagtgattcaggggattcaaaggctaca
gatgcagatttgagtgaaaatatttctgaagtctcaataccagacaaccactctcttgcg
aagctaagggaaaagttctgtatccagtgccttgtagtgctgggagagtatgttgaagtt
cttggacctatgctccatgagaagggggttgatgtctctcttgcattaattcagcgaagt
ctgaagcacaaagaggcatcaactggtatgcgtcttttgcccgatattttgaaattgatt
tgtgccttggctgctcatcgtaagtttgctgcgttattcgtggatcgtggtggcatgcaa
agactgcttgctgttcctagaattgcactgacatatcttggcctgtcatcctgcttattg
acaataggttcaacccaggggataatggagcgtgtttgtgccctaccttcagatgtaatc
agtcagattgttgaattggctctacaacttattgagtgttcacaagatcatcaagcccga
aagaatgcagcatcgtttttagctgccacttttgtcttcagagccatcattgatgcattt
gattcacatgatggtttgcagagactaatgtctcttttgcgtgatgctgcctcagtaaga
tccggggtgtctactgggcaagcaagtaactcaggatctcttcaaaatgatcggtccact
gcagatgtactgacctcttcagagaaaaacatagcttctctgatctgtataacactgcgc
caatatttcagagcacatttccttttgcttgtggattcggtaagacctatgaaaaatatt
cgaagtgcgcctagaaacatttctagagcagcaaacaagccactggacataagcaatgag
gcaatggatgctgttttccggcaaatacagaaggatcggaagctgggccctgcgcttgca
aaggcacgttggcctgtagttgacaaatttttgctatcaaatggtcataccattatgttg
gagttatgtcaggccccaccagtagagcgctatttgcgtgagttgcttcagtatgccctt
ggtgtgctgcagattgtaactttggtaccttatagccgcaagcctattctaaatgccact
ttaagcaatgaccgagtgggtatagctgtcatcttggatgctgcaaatggcgctggctat
gttgaacccgagattgttgaaccagcattgaaccttttgatcaatctcgtttgcccccca
ccatcgatcagcaacaaaccaagctctaacatgcaaggccaacaagcttattctagccaa
actggaaatggttctgctgtggtgcccagtgaaaaaaatgctgaaaggaacattatggaa
cgagcagtcaatgttcctgttcaaaatgaactaagggaacgaaatggagaacctgcttct
gtggacagaggtggctcagtagctccatcaccttcatcagtggcttctggcctagtcgga
gatcgaaggatatcgttaggtgctggagcaggtggtgctgggctagctgcacaactggaa
caatgctataggcaagccagagaagctgttcgtgcaaacaacggtatcaaggttcttctt
cagcttctccaaccaaggatggtaacatctcctgctgctcttgattgtcttcgtgctcta
acatgccgagttcttcttggtttggccagagatgacacaattgctcatatattaacaaag
cttcagataggaaaaaaactttcagagcttattcgggattcagggggccaatctgctgga
ggtgagcaaaacaggtggcaggcagagctcgctcaagtgacatttgagcttattggagtt
gtaactaattctgggcgtgcgagtactttagcggccagtgatgctgctacaccaaccttg
aggcgtatagaaagagctgccatagctgctgctactcccatttcttatcattctagggaa
cttttgttgctgatgcacgaacaccttcaagcatctggtttagcagaaagtgcagctaca
cttcttaaagaggctaagttgacacccttgccatctttagctgctccgtcatctttagca
catcaagccactggacaggaagcttctgcaatacaaattcaatggccatcagctcgtgcc
gtttgtggattcttgtcagataaatcaaaaaattctcatcatcgggaagattccagtttc
agatctgattcaacttatatgtcttcaaagaagaaaaaatttcaatcatcagcttctcat
agtcgctcaaaagttccacccaaaacagaggatagtccagtagtgtcaagcagcaaaata
aatttcaatttagaacaagcctctttagctgcagatggtgtggggactccattactgtct
gttccaaaatttggtggtgatgcagatcctcaggttagaaccccaatagtgttgccaatg
aaacgcaaattgacagacttgaaagaaagtgtgttgggctcatcggcaaaacgacctaac
actggtgaacaatcacttagatctccttgtttcaccacacctaatacttctcgaagaggt
ggtttgtattcagatgcaactctgttctgcacaccgatctctactccgagggagtatcaa
agtagggatattgatgaaaatcagttgactggtctggcttcttcctcccaattgctcagt
gatccacaaccttctggctctgaacggcttaccctggattctcttgttgtccagtactta
aagcaccagcatcgtcaatgttctgcaccaattacaactttacctcctctttcactcttg
caaccccatgtttgtccagaaccaaaaagaagtcttgatgctccatcaaatatcacgtcc
cgtcttagcaaccgggaatttagaagcaagcatggggcacatcatggacttcgaaaggat
cgccagtttgtttatagtagattcagaccatggagaagttgtcgtgacgacactagttca
ttattaacgtgcattgcatttctaggagattcttctcggattgctgctggtgggcatact
ggggatctgaaagtgttcgactctaacagcaacattgtattggacagttgtacaagtcat
cagtctcctcttactcttctgcagtcacacttttctggcgacaatcagcttatactttct
tcaagttcaatggatgttcgcctatgggatgcgtctttggtatctgctggtcccaagcac
tcatttgatggaatcaaagctgctaaatttagtaattcaggtggaacgtttgcagcacta
agatcagattcaccacgccgtgagattcttttgtatgatattcacacgtgtcagttagac
ttgacgttgtctgatacatctaccaacgtttctggtcgtgggcatgcgtattctctaccc
cattttagcccatctgactctatgttgctttggaatggagttttgtgggatcgaagggtc
tcgggtccaattcatcggtttgatctatttacagattacggtggcggtggctttcatcct
gctgggaatgaggttattataaactctgaggtttgggatcttcgaaagtttaggctgctt
cggagcgtgccatcgttggatcaaacaacgattacatttaacgctagtggtgatgtcatc
tacggcattctaaggagaaatctcgaggatgtcacatcagctttcaacactcgccgtgtg
aagcaccctcttttctctgctttccgcaccgtggatgccgtcaattattcggatattgcc
acgatccccgtcgaccgctgtgtgctcgactttgcaaccgatccaaccgattcctttgta
ggtttaatcacattggatgaccaggacgagatgtactcctccgcaagggtgtgtgagatc
ggaaggcgcaagcctacagatgacgactccgatcctgacgatgcagagagtgatgaggag
gacgaagacgacgaggtatttttttggaacaggatgatagtatcatctcacaataagggt
gatttagtcatcacgttttatctattctaa
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integrated database retrieval system
