Salvia hispanica (chia): 125215299
Help
Entry
125215299 CDS
T09851
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
shis
Salvia hispanica (chia)
Pathway
shis04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125215299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125215299
Membrane trafficking [BR:
shis04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125215299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
125215299
NCBI-ProteinID:
XP_047972631
LinkDB
All DBs
Position
3:complement(54083687..54091285)
Genome browser
AA seq
790 aa
AA seq
DB search
MISDGVGEDEEKWLSAGIAGLQQNAFHMHRALDSNNLKDALKYSAQMLSELRTSRLSPHK
YYELYMRAFDELRKLEIFFKEESSRGCSIVELYELVQHAGNILPRLYLLCTAGSVYIKSK
EAPAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTLMDAVEFV
LQNFTEMNKLWVRMQHQGPAREKDKRGKERGELRDLVGKNLHVLSQIEGVDLEMYKEIVL
PRVLEQIVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLNACPQLQASVDVKTVLSRLM
ERLSNYAASGTEVLPEFFQVEAFAKLNSAIGKVIEAQENIPIAGVVTLYASLLTFTLQVH
PDRLDYVDQILGACVRKLSGREKLDDSKATKQIVALLSAPLEKYKDIDTALKLSNYPLIM
ECLSDGTHKEMANVIVQNIMKNKTCISTAEKVDALFELIKGLIRDLDGDTHDELDEDFIE
EQNSVARLIQMLHNDDPEEMLKVIQTVRKHILTGGRKRLPYTVPPLIFSSLQLVRRLERQ
DESVSGDEAPTTPKKIFQLVTQTIEALASIPVPELALGLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEITDSKTQVTSIHLIIGTLQRMHIFGVENRDALTHKATGYSAKLLKKPDQC
RAVYACSHLFWLDDHDNIKDGERVLLCLKRALRIANAVQQMANATRGSSGSALLFIEILN
KYLYFYEKGVSQITVESIHDLTKLIRNEMQGDASPSDPAADAFLASTLRYIQFQKDKGGA
VGDKYMLITD
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtgacggagttggagaagacgaagaaaaatggctgtcagctgggatcgccggc
ctgcaacagaatgcattccacatgcatcgcgcactcgattccaacaatttgaaggatgct
ctcaagtactccgctcagatgctctccgagctccgcacttccaggctctcccctcacaaa
tactacgaactttatatgagggcttttgatgaattgaggaaattagaaatcttcttcaag
gaggaatctagtcgcggttgctccatcgttgagctctatgaactcgtgcagcatgctgga
aacatcttgcccagactatatctgctctgtactgctggctctgtctacataaagtccaaa
gaagctccagcaaaggatgttctcaaagatctggtagaaatgtgtcgtgggatccaacat
cctctgcgtggtctttttctaaggagttacctatctcaagtcagtagggataaattgccg
gacattggatctgaatatgagggggatgctgatactctcatggatgctgttgagtttgtg
ctccaaaattttacagaaatgaacaaactttgggttagaatgcaacaccagggacctgct
agggaaaaggataagaggggtaaagaaaggggtgagctacgtgatctggttggtaaaaac
cttcatgttcttagccaaattgagggtgttgatcttgagatgtacaaagaaatagtgctt
ccccgagtgttggagcagattgtcaactgcaaggatgaacttgcccaatattacttgatg
gattgcataattcaagtattcccagatgaatatcacttgcagacacttgaaacattattg
aatgcctgccctcaacttcaggcttctgtcgatgtaaaaacagtgctttctcggctaatg
gaaaggctttcaaattatgctgcttctggtacagaagtgttacctgaattttttcaagta
gaagcttttgcaaagctgaatagtgccattggcaaggtgatagaagcgcaagaaaatatt
cccattgctggagttgttactttatatgcgtctcttttgacatttactctgcaagtacat
cctgatcgactggattatgttgaccaaattctgggagcatgtgtgaggaaactttcagga
agagaaaagcttgacgatagcaaagcaacaaaacagattgttgcacttttaagtgctcca
cttgagaagtataaggatatagacactgcattgaagctatctaattatcctctgatcatg
gagtgtctaagcgatggaacacataaagagatggccaatgtcattgtacaaaatataatg
aaaaacaagacttgcatatcaactgcagagaaggtagatgcgttatttgaattgataaag
gggcttatcagagatcttgatggagatactcatgatgagctcgatgaggacttcatagag
gaacagaattctgttgcacggcttattcaaatgctgcacaatgatgatcctgaagaaatg
ttgaaggtcatccaaactgtgaggaagcacattttgactggagggcggaagaggcttcct
tatactgttcctccacttatatttagttctctgcagctggttcgtcgactggaaagacaa
gatgaaagtgtctctggcgatgaggcacctacgacacctaagaagatctttcaattagtg
acacagacaattgaggccctggcaagtattcccgttccggaactagctctgggattatat
ttgcaatgtgctgaggctgcaaatgactgtgacctcgaacctgtagcatatgagtttttc
acccaagcttatattttgtatgaagaagaaattacggattcaaaaactcaggtgacttcc
atacacttgataatagggacacttcaaaggatgcatatctttggtgttgaaaatagagat
gcattgacacacaaggcgacagggtattctgcaaagttgttaaagaaacccgaccagtgt
agagctgtttatgcttgctcacacctgttctggcttgatgaccacgataatattaaagat
ggagaaagggtcttgctttgtttgaagcgcgcattaagaatcgcaaatgctgttcaacaa
atggcaaacgcaactagaggcagcagtggatcagctttgctctttatagagatactaaac
aagtatctctacttctatgagaaaggggtctcacagattacagttgagtcgattcatgac
ctaactaaattgatcagaaacgagatgcaaggtgatgcttcaccgtcagatccagcagca
gatgcctttcttgcaagtacattacgatatatacagtttcagaaggacaaaggtggcgct
gtgggggataagtacatgctcattacagattag
DBGET
integrated database retrieval system
