Salvia hispanica (chia): 125215309
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Entry
125215309 CDS
T09851
Name
(RefSeq) cellulose synthase-like protein D4
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125215309
Glycosyltransferases [BR:
shis01003
]
Polysaccharide
Structural polysaccharide
125215309
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
125215309
NCBI-ProteinID:
XP_047972648
LinkDB
All DBs
Position
3:complement(44188045..44191670)
Genome browser
AA seq
1099 aa
AA seq
DB search
MATLTNQPSKKGGKGGSSTVKFARRTSSGKYVSLSKEEIEMSGGEGGDQNSYTVHIPVTP
DNQPVAAKAEEQYVSSSLFTGGFNSVTRAHLMDKVIDSQVSHPQMAGCKGSSCAMPACDG
NVIKDERGNDVIPCECRYKICRDCYMDAQKDTGLCPGCKEPYKSADSDDEIPNYSKGALH
LPGPEKDNKQMSMMKRNHNGEFDHNKWLFETQGTYGYGNAYWPEDGDEDGGMHQGMLETA
DRPWRPLSRVINIPNSIISPYRLLIAIRFVVMCFFLVWRVRHPNEDAVWLWLMSVVCEIW
FAFSWILDQLPKMHPINRETDLPLLRDKFEAPSPANPTGRSDLPGMDVFVSTADPEKEPP
LVTANTILSILAVEYTVEKLACYVSDDGGALLNFEAMAEACSFADLWVPFCRKHDIEPRN
PESYFSLKGDPTKNKNRVDFVKDRRRVKREYDEFKVRINGLPDSIRRRSEAFNAREEMKM
LKHMRETGADTLEPIKVTKATWMADGTHWPGTWAVASREHAKGDHAGILQVMLKPPSSDP
LMGSSEGNIIDFSDVDIRLPMFVYMSREKRPGYDHNKKAGAMNALVRASAILSNGPFMLN
LDCDHYINNCNAIREGMCFMMDRGGEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRA
LDGLQGPVYVGTGCMFRRFALYGFDPPKLDKLPANVDKTAELKTTDFDPELDVNLLPKRF
GNSTLLAESIPVAEFQGRPIADHPAVKYGRPPGILRAPREALDATTVAEAVSVVSCWYED
KTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLRW
ATGSVEIFFSRNNAFLATKKLNVLQRLAYINVGVYPFTSLFLIVYCFLPALSLFSGYFIV
QNLDITFLLLLLTMSVCLIGLAILEVKWSGVSLEDWWRNEQFWLISGTSAHLAAVVQGLL
KVIAGIEISFTLTSKSAGEDNDDIFAELYLVKWSSLMIPPIVIGMVNIIAIVVAFLRTIY
ETTPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRKKTPTIVFVWSGLIAITISLLWVAIN
PSVSQRPAATSGGGGFTFP
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctaacgaatcaaccgtcgaagaagggaggaaaaggaggatcctccaccgtc
aaattcgcgaggagaacatccagcggcaagtatgtcagcctctccaaggaggagatcgag
atgtccggtggcgaaggcggcgaccaaaacagctacacagtccacattccggtgacgcca
gacaaccagccggtggcagcgaaagcggaggagcaatacgtgtcaagttccctattcaca
gggggattcaacagcgtaacgcgggcccatctaatggacaaggtgatcgactcgcaggtt
tcccatccccagatggccggctgcaaagggtcatcgtgcgcgatgccggcctgcgatggc
aatgtgatcaaggacgagcgcggcaacgacgtgatcccttgcgaatgcaggtacaaaatc
tgccgggattgctacatggacgcccagaaagacactgggctctgtcccggatgcaaggag
ccttacaagagtgctgattcagacgatgaaataccaaactactccaagggagccctccac
ctccccgggcccgaaaaggataataaacaaatgtcgatgatgaagaggaaccataatggt
gaattcgatcacaacaaatggttgtttgaaacacagggcacttatggatatgggaatgcg
tattggcctgaggacggggacgaagatggaggaatgcaccagggcatgctcgagaccgct
gatagaccatggcggcctctcagccgcgtcattaatatccctaatagtataattagccca
tacaggctcctcattgctattcgttttgttgtcatgtgcttcttcttggtgtggagagtg
cgccatccaaacgaggatgctgtgtggctctggttgatgtcagtcgtctgcgaaatatgg
tttgcattctcttggattcttgaccagctccccaagatgcaccccatcaatcgagaaacg
gatttgcctctcttgcgcgacaagtttgaagctccttcccccgccaaccccacgggccga
tcagatcttcctgggatggatgtgtttgtatccactgctgatcctgagaaggaaccccct
ctcgtaactgctaacactattctctccatcttagctgtggagtacaccgtcgagaaacta
gcttgctatgtttctgatgatggaggagccctacttaacttcgaagcaatggctgaggct
tgtagttttgctgatctatgggttcccttctgtaggaaacacgacatagaaccccggaat
ccggagtcctacttcagtctcaagggagatcccaccaagaacaagaacagagtggacttt
gttaaggacagaagaagagtgaaaagagagtatgatgagttcaaagtaagaatcaacggg
cttccagattccatcaggagaagatcagaggctttcaatgcaagagaagagatgaaaatg
ctcaagcacatgagggagactggagctgacacattagagcccattaaggtgactaaagct
acatggatggctgacggcacccactggcctgggacgtgggccgttgcatcccgcgagcat
gccaagggcgaccatgctggaattctacaagtcatgttaaagcctcctagctccgatcca
cttatgggaagttccgaaggcaatattatcgactttagtgatgtcgacatacgtctgcct
atgtttgtctacatgtcgcgtgagaaacgccccggttatgaccacaacaaaaaagcgggt
gccatgaatgccctcgtccgagcatcggctattttgtccaatggacctttcatgctcaac
ctcgactgcgatcactacatcaataactgcaacgctattcgggaaggaatgtgcttcatg
atggacaggggcggcgaggatatttgctacattcagttcccacaaagatttgaaggcatt
gatccatcagatcgttatgccaaccacaatactgtcttcttcgatggtaacatgcgagct
ctcgacggcttacaaggtcctgtctatgttgggacaggctgcatgtttcgaagatttgca
ctctatggtttcgatcctccaaaactagacaaacttcctgctaatgtagacaaaaccgcc
gaactcaagaccactgattttgaccctgaactcgatgtcaacttactaccaaagagattc
gggaattccacattactagcggagtccatacctgtggctgagttccaaggtcgtccgatt
gctgatcatccggctgtcaagtatggtcgccctccaggtattcttagggcgcctcgcgag
gctcttgatgcaaccactgttgccgaagccgtctctgtagtctcatgctggtacgaggac
aagacggaatggggggatcgcgtcggatggatctacggttcagtgacggaagatgtggtg
acaggatacagaatgcacaaccgcgggtggcgctctgtctactgtgtgaccaagcgtgac
gcgtttcgcggatccgctcccatcaatctcacagacaggctgcaccaggtgctgagatgg
gccacaggctccgttgagatcttcttctcacgaaacaacgcttttttagccactaaaaag
ctcaacgttctacaacgtctggcctatatcaatgtcggcgtctaccccttcacctcattg
ttcctcatcgtatactgtttcctcccggccctctccctcttctccggctacttcatcgtg
caaaatctcgatatcactttcttactcctgctcctcaccatgtccgtttgcctcattggt
ctggccatactcgaggtcaaatggtcgggcgttagtttggaggattggtggaggaacgaa
cagttctggctcatctccggcaccagcgcgcatttagctgcggtggtgcaaggcctgctg
aaggtgatcgccgggatcgagatctccttcacgttgacatccaagtccgctggcgaggac
aacgatgacatattcgcagaactctacttggtgaagtggtcgtcgctgatgattccgccg
attgtgattgggatggtgaacataatagcgatagtggtggcatttttgaggacgatatac
gagacgacgccccagtggagcaagttcattggcggagccttctttagtttctgggtgttg
gcgcatctctatccttttgctaagggactcatgggaagaagaaagaagacgcctaccatt
gtctttgtctggtcaggccttattgctattactatatccttgctctgggttgccattaac
ccctctgtcagccagcgtcctgctgccacttctggtggtggtggtttcactttcccatga
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