Salvia hispanica (chia): 125215408
Help
Entry
125215408 CDS
T09851
Name
(RefSeq) trans-cinnamate:CoA ligase, peroxisomal-like
KO
K23618
acyl-activating enzyme 11/12 [EC:
6.2.1.2
6.2.1.-]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shis01004
]
125215408
Enzymes [BR:
shis01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
125215408
Lipid biosynthesis proteins [BR:
shis01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
125215408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125215408
NCBI-ProteinID:
XP_047972770
LinkDB
All DBs
Position
3:23376585..23378771
Genome browser
AA seq
578 aa
AA seq
DB search
MDKLPTCEANYVALSPLTFLKRAAAVYSNRASVIHRGVRFTWRQTYERCCRLASALNSLN
IVRNDVVSVLAPNIPALYEMHFAVPMAGAVLNAINTRLDAKTIATILKHSEAKIFFIDYE
FVPVARDALRLLMASLPQADAAASMPLVVVIDDIDTPTGIRLGELEYEALVSQGNPRFVP
EEIADELSPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWGMQTEPVYLWSLPMFHC
NGWTFTWGVAARGGTNVCIRSTTAAEMYDAISTHGVTHMCCAPIVFNILLDAKPHERRRL
SAPVEILTGGAPPPAALLERIESLGFHVVHAYGLTEATGPALVCEWQKKWDRFSNEEKAA
LKARQGISILTLADVDVKDPATMKSVARDGVEMGEIVLRGSSIMKGYLKDEKATSEAFRG
GWFFTGDVGVIHPDGYVEIKDRSKDVIISGGENISSVEVEGALYKHLDVVEAAVVAMPHP
VWGESPCAFVKLREAAEAKEAEIIQHCRKNLPHFMVPKVVKFMDELPKTSTGKIQKFQLR
AVANTFEAPVEKRRSTPPQSKRHDRRQNQEQLLAMSRL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggataaactcccaacatgcgaggcaaattatgtagctctttcccccctcaccttcttg
aagagggctgccgccgtttactccaaccgtgcctccgtcatacaccgcggcgtccgtttc
acatggcgccagacttatgagcggtgttgccgcctcgcctccgctctcaattccctcaat
attgtccgcaacgacgtcgtatccgtgttggccccgaatattccggcactgtacgagatg
cacttcgccgtgccaatggccggcgcggtgctcaacgcgatcaacactcggctcgatgcc
aaaacaatcgccaccatcctcaagcattccgaagccaagatcttcttcatcgactatgag
ttcgtgcccgtagcccgggacgccctgaggctcctcatggccagccttccccaggctgac
gccgccgcgtcgatgcccctggtggtggtgatcgacgacatcgacacccccaccggcatc
cgcctcggggagctggaatacgaggccctcgtatcccaaggcaatccgagattcgtgccg
gaggaaatcgcggacgagttaagccccatcgcgctgaattacacctccggcacgacgtcg
gcgccaaagggggtggtgtacagccaccgcggcgcgtatttaagcaccctcagcctgatc
ctcgggtgggggatgcagaccgagccggtgtacctgtggtccctcccgatgttccactgc
aacggctggaccttcacctggggagtggcggcgcgcggcggcaccaacgtgtgcatccgg
tccaccaccgccgccgagatgtacgacgccatctccacccacggcgtcacccacatgtgc
tgcgcccccatcgtcttcaacatcctcctagacgccaagcctcacgagcgccgccgcctc
tccgcccccgtcgaaatcctcacaggcggggccccgccgccggccgccctcctggagcgg
atcgagagcctgggattccacgtggtgcacgcgtacgggctgaccgaggcgaccgggccc
gcgcttgtgtgcgaatggcagaagaagtgggaccgcttctctaacgaagagaaggcggcc
ttgaaagctagacaaggaataagcatattgacgcttgctgacgtggacgtgaaggatccc
gctacgatgaagagcgtggcgcgggacggggtcgagatgggggagatcgtgctgcggggg
agcagcatcatgaaagggtacctgaaggatgagaaggccacgtcggaggccttccggggc
gggtggttcttcacgggagacgtcggggtgatacacccggacggctacgtggagatcaag
gacaggtccaaggacgtgatcatctccggcggggagaacatcagcagcgtcgaggtcgag
ggggcgctctacaagcacctcgacgtggtggaggcggccgtcgtcgccatgccccacccc
gtctggggggagagcccctgcgcttttgttaaactgagagaggccgcggaggccaaggag
gcggagatcatccagcactgcaggaagaatctgccgcatttcatggtgcccaaggtggtg
aagtttatggatgaattgccaaagacttcgacggggaagattcagaagtttcagctgagg
gcggtggcgaacacgtttgaggctccggtggagaagaggcggtcaacgccgccgcagagc
aagaggcatgatcgtcgccaaaatcaggagcaacttcttgctatgtctcgtctctga
DBGET
integrated database retrieval system
