KEGG   Salvia hispanica (chia): 125215640
Entry
125215640         CDS       T09851                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
  KO
K12897  transformer-2 protein
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125215640
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:shis01009]
    125215640
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125215640
Protein phosphatases and associated proteins [BR:shis01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125215640
Spliceosome [BR:shis03041]
 Common components
  Common spliceosomal components
   SR proteins
    125215640
Motif
Pfam: RRM_1 CoV_nucleocap RRM_5 SDP_N RRM_occluded
Other DBs
NCBI-GeneID: 125215640
NCBI-ProteinID: XP_047973079
LinkDB
Position
3:complement(23854134..23857213)
AA seq 242 aa
MADSPRKRYVRSPSPWEENSRSRSRSRSKSRSRSRSWSRPRERSRSRSRSRGRGTGREEV
VNDGTTLYVTGLSTRVTEKELEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVNMVTSDDAN
RCIKHLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSSRGDGYGDRGRYRGGSSREDY
GYRRSPRRSPYRGGRDYSPRGGRDYSPRHSPYGGSGRSRRERSRSYSPPRHSPERNYARG
SR
NT seq 729 nt   +upstreamnt  +downstreamnt
atggctgattctccgagaaaacggtatgtacgctctccttctccatgggaagaaaattcg
agatccaggtcaagatctaggtccaaatccagatctcgttctagatcatggtcaagacca
agggagagatctagatcaaggtctaggtcaagaggtcgtggcactggcagggaagaagtt
gttaatgatggaactacactttatgttactggcctatctacacgggtcactgagaaagaa
cttgaagatcatttctcaaaggaaggaaaggttaagtccgtctttttggttgtggagcct
cgatctcgtgtatctcgtggatttgcttttgtcaatatggtcacttcagatgatgctaat
cgctgtatcaaacacctcaatcagtcagtgcttgaaggccggtacataactgtagagagg
tcacggcggaaacgtgcaaggactcccactcctggtcattatcttggtctgaaaagttca
cggggtgatggttatggtgatcgtggaaggtatcgtggaggatccagccgcgaagattat
ggctacaggaggtctcctagacgctcgccatacagaggtggacgtgattactctcccaga
ggtggacgtgattactcacccagacattctccttatggtggaagtggaagatcaagaagg
gaaaggtccaggtcatactctcctccccgacacagtcctgaaaggaactatgcacgtggt
tctaggtga

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