Salvia hispanica (chia): 125215642
Help
Entry
125215642 CDS
T09851
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
shis
Salvia hispanica (chia)
Pathway
shis04016
MAPK signaling pathway - plant
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
125215642
04075 Plant hormone signal transduction
125215642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125215642
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125215642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box
F-box-like
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
125215642
NCBI-ProteinID:
XP_047973081
LinkDB
All DBs
Position
3:42160425..42163757
Genome browser
AA seq
667 aa
AA seq
DB search
MSKVFDFSGDIGFMFQKPKESRPFLSLGSHVDVYFPPSKRSRVNAPFVVSEYPKEQPSIE
VLPDECLFEIFRRLGGEERSACASVSKRWLMLLSSICADEICSSVAQTMEPEIVSDCKKA
DESAKPKEKVESVDLNDEECVDADPQGYLSRCLEGKKASDVRLAAISVGTASRGGLGKLS
IRGNASTRRLTDIGLNAVSRGCPSLGVLSLWNTSSVRDEGLSAIATGCRSLQKLDLSHCP
GITDKAVIAVAMNCPNLRSVKLESCSNIGDESLKALGRYCPNLESIMVKNCSLVGDQGIA
GLFSAAGHILTKGNLQGLNISDVSLAVIGHYGSAMTDLSLVGLHNVSERGFWVMGKGQGL
KNLKCLSIISCQGVTDAGLDAIGNGSPGLKVFCLRRCALVSDNGVVSFSRVASSLESIKL
DETHRITQFGVFGILASCGGKLKALALSNCLGLKDLNFAFPLSSLCTSLRSLAIHNCPGF
GDSGMNVLVRLCPKLTHVDLIGLEGVTDAGLLPLSQRQEAGLVKVNLSGCVNLTDSLVAR
IASLHGETLEVVNLERVSGITDVSLMSIAANCSVLRELDVSGCRVTNSGVALLSGAGQLS
LQVLSLAGCSLVSDKSFPFLKMLGTTLVGLNIQLCHGISSAAINLLLEQMWRCDTFLRCR
KIMNRIS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtttttgattttagtggtgatattgggtttatgttccaaaaaccaaaagaa
tcaagaccctttttgtctcttgggagtcatgtcgatgtctattttcctccatccaagaga
tctcgtgtcaatgctccctttgttgttagtgaatatccgaaggagcaaccttctatcgaa
gttcttcctgatgagtgcctgtttgagatcttcagacgtcttggaggcgaagagaggagc
gcgtgtgcctctgtatccaagcgttggctcatgcttttgagcagcatctgtgcagatgag
atatgcagctctgttgctcagaccatggagcctgagattgtatctgattgtaagaaggct
gatgaatctgccaagcctaaagagaaggttgaatctgttgatctgaatgatgaggaatgt
gttgacgctgaccctcagggttatctatcgaggtgtttggaagggaagaaggcctcggat
gtgagactggctgcgatttctgttggaactgcaagccgtggaggtttgggaaagctatcc
atccgaggaaatgctagcactcgtaggttgacagacattggattgaatgctgtgtcgcgt
ggttgcccttctttgggggttctttctctgtggaacacatcctctgttcgtgatgaaggg
ttgtctgcaattgcaactggttgccgttctctccagaagctagacctctcccattgtccg
ggtatcactgataaggccgtgatcgcagttgccatgaactgccccaatctaagatcagtt
aaactagagtcttgctcaaacattggtgatgagagcttgaaagctttgggccgttactgc
cccaacctagagtcgatcatggttaaaaattgctcccttgttggtgaccaggggattgct
ggtctgttttctgcagctggacacatcctaaccaaaggtaatcttcagggactcaacatc
agtgacgtgtctcttgctgtaattggccactatgggagtgcaatgactgatctttctctt
gttggcctccacaatgtgagtgagaggggcttctgggtgatgggtaagggtcaaggtttg
aaaaatctgaaatgtttatcgattatttcgtgccaaggagttactgatgcgggtcttgat
gctattggtaatggcagcccgggtctgaaggtgttttgcctccggagatgtgctcttgtg
tctgacaatggggttgtgtcattttccagagttgcttcatcgcttgagagcattaagctc
gacgagactcataggattactcagtttggggttttcggcatccttgctagctgtgggggg
aaattgaaggcacttgctctgtccaattgcttagggctcaaagacttgaactttgcattc
ccattgagttctctttgcacgtctctgagatcgttggctatccataactgcccagggttc
ggtgattctggtatgaacgtgttggttcggctgtgccctaaactaacacacgtggatctt
attggccttgaaggagtaactgatgccggtctcctccctctcagtcagaggcaggaggct
ggtctggttaaggttaatctgagcggatgtgtaaacctaactgacagcctggttgcaagg
atcgctagccttcacggggaaactctggaggttgtgaatcttgaaagagtcagcggcatc
actgatgtgagtttgatgtcaatcgcagcgaactgctcagttctgcgtgagcttgatgtc
tctggctgcagggtaacgaattcgggtgttgccctcttgtctggggccgggcagctgagc
ttgcaggtgctctcccttgcgggctgttcgttggtgtcagacaagagttttccattcttg
aaaatgctcggcacgactctggtgggactcaacattcagctttgccatggaatcagctct
gctgctattaatttgcttcttgagcagatgtggaggtgtgacactttcttaagatgcaga
aaaatcatgaatcgaatttcttga
DBGET
integrated database retrieval system
