Salvia hispanica (chia): 125215695
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Entry
125215695 CDS
T09851
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125215695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125215695
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
SR proteins
125215695
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SET_assoc
RBD_RDR6
RNA_bind
DUF2457
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125215695
NCBI-ProteinID:
XP_047973156
LinkDB
All DBs
Position
3:complement(28287557..28289602)
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AA seq
257 aa
AA seq
DB search
MENEPLCWLVICKGYPRAGSLSHTNGNVAHVSDHNKLVPVEYAFVYFEDVNDATKAIREL
QGNPFGSQRLRMQVKWAVGKRRGRHGDLESNPRPTRTLFVKRFDPVRTKNRDIEKHFEPY
GRVLNVRMSRDVAFVHFETQEDATSALELSQSSMLFDTVLRVEYAFKEDNDRHRRKKRKR
RNYASSRLPSPAYRHRRASPVYDRYAGPSNPRARSPKRVLRASPVYDRYEGPTNPRARSP
DRARAKSRAKVETVMRK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgagcctctatgttggcttgtcatatgcaagggatatccacgtgccggatct
ctctcacacacgaatggaaatgttgcacatgtttctgatcataataagttagtacctgta
gaatatgcttttgtctatttcgaggatgttaatgatgcgacaaaggccatccgagaactt
caaggcaatccatttgggtctcaaagactcagaatgcaagttaaatgggctgtgggtaag
cgtcgtgggcgtcatggtgatttagaatcaaatccaaggccaactagaaccctttttgtg
aaacgctttgaccctgttcgtactaaaaatcgtgacattgaaaaacacttcgagccttat
gggagggttcttaatgtacgtatgtcaagggatgttgcttttgtgcatttcgaaactcag
gaggatgccacaagtgccctggagctctcccagagtagtatgttatttgatacagttctt
cgtgttgagtatgcttttaaggaagataatgataggcacagaagaaagaagcgaaagcgt
agaaattatgcttcctcgaggttacctagtccagcataccgccacagacgagcaagtcct
gtttatgataggtacgctggtccttcaaatccaagggccaggagtcctaaacgtgtgctg
cgagcaagtcctgtttatgataggtacgagggtcctacaaatccaagggctaggagtcct
gatcgtgcgcgagcaaagtcccgtgcgaaggttgagacagtgatgaggaagtag
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