Salvia hispanica (chia): 125215789
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Entry
125215789 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125215789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125215789
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125215789
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125215789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_4
DUF7567
Motif
Other DBs
NCBI-GeneID:
125215789
NCBI-ProteinID:
XP_047973295
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All DBs
Position
3:complement(30438045..30441506)
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AA seq
318 aa
AA seq
DB search
MEMDNISSIEGNEDEEMQSAVSHSNQNAHSHQCSSKPLGGFVAGLAPTSVHELLECPVCT
NSMYPPIHQCHNGHTICSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFFSLG
CAEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDTPHLVAHLRDDHKVDMHTGCTFNH
RYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLRMAPVYMAFLRFMGDEAEARNYSY
SLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQQNPDAGVCIPNLST
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggataatatttcttcaatagagggaaatgaagatgaggagatgcagtctgca
gtttcccacagcaatcagaatgctcattctcatcagtgttcttccaagcctctcggcggg
ttcgtggctggactggcgccaaccagcgtgcacgaattgctcgagtgtcccgtttgcacg
aattcgatgtacccacccatccatcagtgtcacaacgggcacacaatctgctccacttgc
aagtcgagggtgcataatcgctgccctacctgcagacaagagctcggagatatcaggtgt
ttagcactagagaaggtcgcggagtcactagagcttccctgcaagtttttctcactgggg
tgtgccgaaatattcccgtattacagcaaactcaagcacgaaacagtttgcaacttcaga
ccatacagttgtccgtatgccggatcagagtgctcggtcacaggagacactcctcacctg
gttgcacatttgagagacgaccacaaagtggacatgcacacagggtgcaccttcaatcac
cgctatgtcaagtcaaacccccgtgaagtagaaaacgcaacgtggatgttaacagtattc
cattgtttcgggcaatatttctgccttcatttcgaagcgttccagctgaggatggcgccc
gtgtacatggcgttcctccgtttcatgggtgatgaagctgaagcgcgcaactacagctat
agtttagaggtgggagctaacgggaggaagctgatatgggaggggacgccgcggagcatt
cgggacagccaccgcaaggtgagggatagtcacgacgggctgatcatccaacggaacatg
gcgctgtttttctcgggcggcgacaggaaggaacttaagcttagagttactggaaggatc
tggaaggaacagcagaaccctgatgccggggtctgcataccaaatctttctacctaa
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