Salvia hispanica (chia): 125215853
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Entry
125215853 CDS
T09851
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125215853
03036 Chromosome and associated proteins [BR:
shis03036
]
125215853
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125215853
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125215853
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125215853
microRNA pathway
RISC loading complex
125215853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
125215853
NCBI-ProteinID:
XP_047973375
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All DBs
Position
3:4872125..4880287
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AA seq
945 aa
AA seq
DB search
MEALTTLRAQWRHSQICEHNVAGLDFAFFLAQWCSQTNGARKSRHKFATSVRRYMEGTPE
MLPPPPPVVPPNVVPQKVAIGKRVPMSRPGVATRGQSIPLLVNHFKVTVAKSEGYFYHYS
VSIKYEDGNPVDAKGIGRKILEKLHETYVVELDGKKCAYDGEKSLFTIGPLPQNKLEFTV
ILDEVSSNRSTGRGSPEADGSPTDLDRKRLRKQPRSKTYNVAISYAAKIPMQAIPNALRG
QDSEHFQESVRVLDIILRQNAAQQGCLLVRQSFFHNDDRNYVDLGGGVFGCRGFHSSFRA
TQGGLSLNMDVSTTMIVRPGPVIDFLLFNQNIDNPSRIDWVKAKRALKNLRVRATNSNRE
FKISGLSDFVCKEQTFSLKQRSEGREVEITVYDYFLNERNIQLKYSGDMPCLNVGKPKRP
TYIPVELCSLVSLQRYTKALSNFQRAALVEKSRQKPHERMNALKNGLSKSNYAADPLLQS
AGVTISTEFTRIQGRVLAPPKLRVGNGEDFAPRNGRWNFNQKKLVEPVKIERWAVVNFSA
RCNMHNLCKDLIRCGNMKGIIIHDPYVMIEEMAQSRRSPSPIRVDDMIGLVKTKLPGPPQ
FLLCILPEKKNSDLYGPWKKRNLSELGVVTQCIAPTRINDQYLTNLLLKINAKLGGLNSI
LTTENAPPRPLPLVYSKPTIIIGMDVSHGSPGRDVPSVAAVVSSRKWPLISKYRAAVRTQ
PPRSEMIECLFKPTSATEDAGIFRELLNDFYESCGRRPEQIIIFRDGVSESQFNQVLNIE
LEQIIQACKFRDEKWEPKFMLVVAQKNHHTKIFQANSPDNVPPGTVIDNGICHPRNNDFY
MCAHAGMIGTTRPTHYHVLYDELGYSPDDFQEFVLSLSYVYQRSTTAISIVAPICYAHLA
AAQMSQFLKFEDLSDKSSSHSGGGGPTVPELPVLEEKVRSSMFFC
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggaggcactcacaactttgcgagcacaatggaggcactcgcaaatttgcgagcacaat
gtagcaggcctggacttcgccttctttctagcacaatggtgctcgcaaacgaatggtgct
cgcaaaagtcgtcacaagtttgcgacgagcgtgagaagatatatggaaggtacaccagag
atgctacctccccctccccctgtggtcccacccaatgttgtgccacagaaagtagctatt
gggaaaagggttcccatgtctaggcctggagttgccaccagagggcaaagcatcccactc
ttggttaaccattttaaggttactgtagccaagagtgagggctacttctatcactacagt
gtctcgatcaagtatgaagatggtaaccctgttgatgcaaaaggaattgggagaaagata
ctagaaaaacttcatgaaacatatgttgttgagctggatgggaaaaagtgtgcatatgat
ggtgagaagagcttgttcactattggtcctttgcctcaaaacaaactggagttcactgtg
attttggatgaagtttcctcaaataggagcactgggagaggaagccccgaagctgatggt
agccctactgaccttgatagaaaacgtctacgtaagcagcctcgttcaaagacttacaat
gtggcaataagctatgctgcaaagatcccaatgcaagccattcccaatgcacttcggggg
caagattctgagcactttcaagaatctgtgagagtgctagatatcattctgagacagaat
gctgctcaacaggggtgccttctagtgcgtcagtccttcttccacaatgatgatagaaac
tacgtggacttgggaggtggtgtcttcggttgccggggtttccattctagttttagagca
acacaaggaggtctttccttgaatatggatgtatcaaccaccatgatcgttaggcctgga
ccagtgatagattttctcctcttcaatcaaaatattgataatccctcacgcattgattgg
gttaaggccaagagggcactgaagaatctgagggtccgggcaactaattcgaatagggaa
ttcaagatcagcggcttgagtgacttcgtgtgcaaggagcaaacgttctcactgaaacaa
agaagtgaaggacgagaagtggagatcactgtatatgactattttctcaatgagcgcaat
atccagttgaagtattcaggagatatgccatgcctgaatgtggggaaaccaaagcgtccc
acttacattcctgttgagctatgctccttggtatcccttcaacggtatacaaaggctttg
tcaaattttcagagagctgcacttgtagaaaagtctagacaaaagcctcatgagaggatg
aatgccttgaaaaacggcctgtcgaaaagcaactatgccgctgatcctcttcttcaatcg
gctggagttacaatcagcactgaatttactcgcattcagggccgtgtcttggcaccacct
aagctgagagttggcaatggagaggactttgcgccacgtaacggaaggtggaacttcaac
cagaagaaactggttgagcctgtcaaaattgaaagatgggctgttgttaacttctctgct
cggtgcaatatgcacaacttgtgcaaagacttgatcagatgtggaaacatgaaaggaata
atcatacatgatccttatgtaatgatcgaagagatggcacagtcaaggcgaagcccttct
cctatccgggttgatgatatgattggcttggtcaagacgaaacttccaggcccccctcag
tttcttctctgcattctgccagagaagaaaaactctgatctctatggcccttggaagaag
aggaatctttctgaacttggtgtggtgactcaatgcattgcgccaacacgcatcaatgac
cagtacttgaccaatttgctgctgaagatcaatgccaagcttggtggcctgaattctatc
ttaactacagaaaacgctccaccaaggccactacccctggtttatagcaaacccaccatt
atcataggaatggatgtttcccatggttcacctggccgagatgtcccctctgttgctgcg
gttgttagttcgaggaaatggcctttgatatccaaataccgggcagcagtccgtactcaa
ccgccaagatctgagatgatcgagtgtctgttcaagccaacttctgcaactgaagatgca
ggcattttcagggagctactgaacgatttctatgagagctgtgggcgtagaccagaacaa
ataatcattttcagggatggagtgagcgagtcccagttcaaccaagtcctaaacattgag
ctggagcagattatccaggcttgcaagtttagagatgagaaatgggaacccaagttcatg
ctggttgtggcacaaaagaaccaccataccaagatcttccaagccaactctcctgacaat
gtccctccagggacggtgattgacaatggaatatgccatcctagaaacaatgatttctat
atgtgtgctcatgctggaatgattggaacaacccggcccacacactatcatgttctctac
gatgagctcggctactctcctgatgattttcaggagtttgtgctctccttgtcctatgtg
taccagagaagcactacagccatatcaatagtggctcctatatgctatgctcatcttgct
gcggctcagatgtctcagttcctgaagtttgaagacttgtcggacaagtcatcgagccac
agtggtggcgggggccctactgtgcctgagcttccagtcctggaggagaaagtccgcagc
tccatgttcttctgctga
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