Salvia hispanica (chia): 125215933
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Entry
125215933 CDS
T09851
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125215933
Transcription machinery [BR:
shis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
125215933
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Mg_chelatase_C
Motif
Other DBs
NCBI-GeneID:
125215933
NCBI-ProteinID:
XP_047973474
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Position
3:complement(4059410..4062753)
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AA seq
509 aa
AA seq
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MGVMTVSSSSGRIPLGVKARNLTRAERLVVLSFKSNESKPVSLVAKRESLALPLETNKDT
RKITRKVKKRTERVKAVASPSILELDYGEAGAILEKLYKRSPGTDVSDEEVKIGRGKRRR
PLRKKSVETEEAEKERDVSVVRSQKKGKRLNLEKRISMRMKKEDEFVALAQNKKNRKNDE
DEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDL
GRDLTDDEVAKKINMDVFQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGPRFQ
DLCQAGVKGLMTGIDRFEPRRKFRLSTYGLFWIRHAIVRSLTLSNFTKVSFGLDSVRVEI
QRAKQELHFELQRIPTVEEITKRVGISPERYHEVMRASKPIASLHARHDVTNEEFINAIT
DVDGVEGDSRRQPALLRLALDDVLDSLKPKESLVMRQRYGLDGKRDRTLGEIAGNLNISR
EMVRKHEVKALMKLKHPARVDYLRRYIYK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcatgactgtttctagttcttcaggacgaattccattgggagtgaaagccaga
aatttgactcgtgcagagaggctagtagtgttgtctttcaaatccaatgaaagtaaacct
gtatccttggttgctaaacgagaatctctagctttacccttggagacgaataaagatact
aggaagataacgaggaaggtgaagaagcggactgaacgagtaaaagcagtcgcctctcca
agtatattggagttggattacggcgaagcaggtgctatacttgaaaaattatacaagcga
agtcctggtacagatgtatccgatgaggaggtcaaaataggaagggggaagagacggcgg
cctcttaggaagaagagtgtggaaactgaggaggcagagaaggaaagggatgtgagtgtg
gtgaggagccagaaaaaggggaagagattgaatctcgagaagagaatttctatgagaatg
aagaaagaagatgaatttgttgcattagcccaaaataagaaaaacagaaagaatgatgaa
gatgaaaagattgataggcttgttagggagtatacttcttcgacggatttggtaagctta
gactggaagaaaatgaagattccgcctgttcttccttcatctgagcatgcctggcttttc
aaactgatgcaacctatgaaggaaatcctcaaagttaaggaaaccttaaaaagtgattta
ggaagagatctaactgatgatgaagtagcaaagaagataaatatggatgtatttcagctg
cggaaacagttagaagttggtcgagctgccagaaataagttgatcaagcacaacctgcgg
cttgttctatttgtcatgaataagtattttcaagactttgctaatggcccaagattccaa
gatctctgtcaagctggggtgaagggtcttatgactggtattgatcgctttgaaccaaga
aggaagttccgactctcaacatatggcctcttctggatcaggcatgccattgttcgctca
ttaacactgtcaaacttcacaaaggtctcctttggccttgactcggtcagagtagaaatc
cagagggccaagcaggagctgcattttgagcttcagaggataccaactgttgaagagatt
acaaaacgtgttggaatctcccctgaaagataccatgaagtgatgagggcatcgaagcct
attgcttctctccatgcacgccatgatgtaaccaatgaggagttcatcaatgccattact
gatgttgatggtgttgaaggagatagtaggagacaaccagcacttctcagacttgctctt
gatgatgtgcttgattctctgaagcccaaggagagtttggtgatgaggcagagatacggg
ctcgatgggaaaagagatagaacacttggagaaatcgctgggaatttgaacatttcaaga
gagatggttcggaagcatgaagtgaaggctcttatgaagctcaagcatccagctcgagtg
gattacctccgccgctacatttacaaatga
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