Salvia hispanica (chia): 125216121
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Entry
125216121 CDS
T09851
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00900
Terpenoid backbone biosynthesis
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Module
shis_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125216121
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shis01006
]
125216121
Enzymes [BR:
shis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
125216121
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
125216121
2.5.1.29 geranylgeranyl diphosphate synthase
125216121
Prenyltransferases [BR:
shis01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
125216121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
125216121
NCBI-ProteinID:
XP_047973702
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All DBs
Position
3:28549697..28551890
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AA seq
329 aa
AA seq
DB search
MVFSSVIASTPHVCLPKIARPALRRTIRCSAASVSPGFDLKTYWTSLIREIDQKLDEAIP
VKYPEQIYESMRYSVLAKGAKRAPPVMCVAACEIFGGNRLAAFFCSVLAVHAASLIHDDL
PCMDDDPSRRGKPSNHTVFGEDMAILAGDALFPLGFQHIVSHTPTDLVPQSRLLRVIAEI
ARAVGSTGMAAGQFLDLEGGPNAVDLVQEKKFGEMGQCSAVCGGLLAGASDDEIEHLRKY
GRAVGILYEVVDDIREAKQQSGEEDGGKSKGKSYVSVYGVEKAMEVAEDLRSQAKKELDR
LEKYGDKVMPLYSFVDYAADRYFGFEELV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggttttctcttccgtaattgcatcgactccccacgtttgcttgccgaagatcgcccgc
cccgcgctccgccgcacgattcgatgctccgccgcgtcggtttcgccgggattcgatctc
aagacgtattggacgtctctaattagagaaatcgatcagaagctcgacgaggcgattccg
gtgaagtacccggagcagatctatgaatcgatgcgctattcggttttggccaagggcgct
aagagagcgccgccggttatgtgcgtcgccgcctgtgagattttcggcggtaatcgcctc
gccgccttcttttgctctgttttagcagtccacgctgcttcactgatacacgacgacttg
ccatgcatggatgatgatccatcaagaagaggcaagccctccaaccacacagtattcggt
gaggatatggcaatattagcaggggatgcattgttccctcttggtttccaacatattgtg
tcccacacccccacagatctcgtccctcaaagccgcctccttcgggtcattgctgagatc
gcaagggcagtggggtccaccggcatggctgcaggtcagtttctcgacctcgagggtggg
ccgaacgcagtcgatctagtgcaagagaagaagtttggtgaaatgggccagtgctctgct
gtttgcggcggcctgcttgccggtgcctcggatgacgagattgagcacctgaggaaatac
ggccgggctgtgggtattttgtatgaggtggtggatgacatccgggaagcgaaacagcag
tcgggagaggaggatggaggcaagagtaagggtaagagttatgtgtctgtgtatggagtt
gagaaagcaatggaggtggctgaggatttgagatcacaagcaaagaaagagttggatagg
ttggagaaatatggtgataaggttatgcctttatatagctttgttgattatgctgctgat
aggtattttgggtttgaagaattagtttaa
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