Salvia hispanica (chia): 125216167
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Entry
125216167 CDS
T09851
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125216167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125216167
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125216167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
125216167
NCBI-ProteinID:
XP_047973765
LinkDB
All DBs
Position
3:complement(22549237..22552586)
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AA seq
447 aa
AA seq
DB search
MEMDAGKLFIGGISWDTSEERLRQYFQAFGEVVEAVIMKDRATGRARGFGFIVFANASVA
EKVVKEKHVIDGRTVEAKKAVPRDDHQNFNRNSGSIQGSPSHVRTKKIFVGGLASTVTES
DFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPTRSPSPSYIYGLNRANSFLNAYSPGYNPNSTSGYGMRMDGRFSPVTAGRS
GYPPYSPSNHNLGLNLDSGLSLNYGASRDSGLGYGNGTNSYFSGDISRYGSSNVYDLVGG
GSSSLLSSTNRNMWGNGSPSFVTNSANSNDYVGTRTGNAGIGSGFGSVGEIWGSSPLSVK
GAEVSRENGGIASSTPLYSMANNLREENFGNLYGGPFNGDQAWPRSSSLELEGYGYGRES
GAAEVISENPAGYAGGYSVRSIRGIAA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatgctgggaagctgtttattggtgggatttcgtgggacacgagtgaggaa
cgtctgagacagtatttccaagcttttggtgaagtggtggaagctgtgataatgaaggat
cgtgctacaggccgtgctcgtggctttggtttcattgttttcgcaaatgcttcagttgct
gaaaaagttgtgaaggaaaaacatgtcatagacggcagaactgtggaggcaaagaaagct
gttccgagggatgaccaccaaaacttcaacagaaatagtggcagcattcaagggtcccct
agtcatgtccgcacaaagaagatttttgtcggaggtttagcatcaactgtcaccgaaagc
gacttcaagaagtattttgatcaatttggaataatcactgatgtagttgtgatgtatgat
cacaatacacaaaggcctagaggctttggttttataacttatgattcagaagaagcagtt
gacaaagttctattgaaaacctttcatgagcttaacgggaaaatggttgaggttaagaga
gcagttcccaaagagttatctccaggaccaacacgaagcccttcacccagctatatctat
ggcctcaatagagcaaacagtttccttaatgcttattcgcccggatataatccaaattct
acaagtggatatggaatgagaatggatggtcgctttagtcctgtaactgctggtcgaagt
ggatatcctccctacagccccagcaaccataacttaggactgaatttggattctggcctc
agtttgaactatggggctagtagggattctggtttaggctatggaaatgggacgaactct
tattttagtggagatataagtcgatatggcagttccaatgtgtatgacttagtcggcggt
ggaagtagttctttgctgagtagtacgaaccggaacatgtggggaaatggtagtcctagt
tttgttacaaactctgcaaattctaatgattatgttggaactcgaactggaaatgctgga
ataggtagtggttttggaagtgtaggagagatttggggcagttcgcctctttctgttaaa
ggcgcagaagtaagcagagaaaatggaggcattgctagctctacacctttatattctatg
gcaaataatctccgtgaggagaattttgggaacttatacggtggaccatttaatggggat
caggcatggccgcgttcatcatctctagaactcgagggatatggttatgggcgtgagagt
ggtgcagctgaggtcatatctgaaaatccagctggttatgccggtggttatagcgttagg
tcaattagagggatcgcagcctag
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