Salvia hispanica (chia): 125216258
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Entry
125216258 CDS
T09851
Name
(RefSeq) transcription factor GAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125216258
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
125216258
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
125216258
NCBI-ProteinID:
XP_047973877
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All DBs
Position
3:complement(11676495..11681328)
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AA seq
541 aa
AA seq
DB search
MVYIGDRMSTESDERTKPNSGVDSPSVDDVTEGNVGGNGPLKKGPWTSAEDAILVEYVTK
NGEGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAFTAEEEHRIIELHAQMGNKWAR
MAAELPGRTDNEIKNYWNTRIKRRQRAGLPIYPPDICSQPLNDNLQSDDMSNLSSGNVHH
PELMPNNNFDIPAVEFKNLELNRHIFMLNFPPGNLPDIPASSLLTQSLSNPYHNKSVLPT
VHPSKRLCGSEPMFPGLNAPICNAFPGGNQYHFDSSMQIGKSPVFSAYDHNPATDNARTS
SLPNGSHAVLNGNSSSEPSWATKPELPSLQTQMGTWGSPSPSSPLRYLESDENLIQSPPN
EPMNSCNLSRQNSGLLEAVLSESETIRNSKSNSVNTPHAPTFMDDSLHTLHETEWGAYDN
QLSPLGHSSPSMFSGNSLDETFHTGTFPVKEEAINGGLLTYDDSIEARNQMIFSRPDFLL
ASNCFSPVKHQTNEHTVKDAIEAFYGDDLSKDYKIVDAVATPSTPSHHDHDSSAWNAMPT
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtttatataggagatagaatgtcgactgaaagtgatgagaggacgaagcccaacagt
ggcgtagattccccatctgttgatgatgttactgaaggaaatgtcggagggaatggccca
cttaaaaaaggtccgtggacttctgcagaagatgcaattttagttgaatatgttaccaaa
aacggagagggtaactggaatgcagttcagaaacactcgggtcttgcccgctgtgggaaa
agttgtcgtttgaggtgggcgaatcacctcagaccagatcttaagaaaggtgcatttacg
gctgaggaggagcatcgcataattgaactccatgcccagatgggaaacaaatgggctcga
atggctgctgagttgcctggccgcacagataatgagattaagaattactggaacaccaga
atcaaaagaagacaacgtgccggtttaccaatttatccacctgatatctgttcgcagcca
ttgaatgacaacctgcaaagtgatgacatgagtaatttatcctctggtaacgtgcaccat
ccagaactcatgccaaataacaattttgacattccagctgtggaatttaagaatttggaa
cttaatcgccatatattcatgctgaactttcctcctggtaacttgcctgacattcccgca
agtagcctgcttacgcagagtctaagcaatccgtaccataacaagtccgtgctcccaaca
gttcatccatccaagcgtctttgcgggtcagaaccgatgttccctggcttaaatgctcct
atatgtaatgctttcccaggtgggaatcaataccattttgatagttctatgcaaattggg
aaatcgccagtgttctctgcatatgatcataatcctgcaactgacaatgcgagaacttca
agtttacctaatggcagccatgccgtcttaaatggcaactcttcttcagagccttcttgg
gcaacgaagccggagctcccttcactccaaacacagatgggtacttggggctcaccctca
ccctcttccccgttgcgttaccttgagtccgatgaaaatttaatccagtcgcccccaaat
gagcccatgaactcatgtaatctttcacgccaaaatagtggtctattggaagcagttcta
tctgaatcagaaaccataagaaactccaagagcaacagtgttaataccccacatgcaccc
acttttatggatgactcattacatactctccacgagacggaatggggagcatatgataat
caactctctcctttaggtcattcttccccatcaatgttcagtgggaactcgttggatgag
accttccatacggggacttttccagttaaggaagaagcaataaacgggggcctattgaca
tatgatgatagcattgaggcaagaaaccagatgatcttttccagacctgattttttgctt
gcctcgaactgcttcagcccagttaagcaccaaactaacgaacacactgtaaaagatgca
atcgaagctttttatggtgacgatttgagcaaagactacaaaatagttgacgcagtggca
actccatcaactccaagccaccatgatcatgattccagtgcttggaatgccatgcctacc
atctag
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