Salvia hispanica (chia): 125216299
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Entry
125216299 CDS
T09851
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125216299
Enzymes [BR:
shis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
125216299
Glycosyltransferases [BR:
shis01003
]
Polysaccharide
Structural polysaccharide
125216299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
125216299
NCBI-ProteinID:
XP_047973934
LinkDB
All DBs
Position
3:complement(35185280..35188667)
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AA seq
518 aa
AA seq
DB search
MCRLKDCEESKRRRKWGIMGLKTAAFAGDKLEKLRNSGVVSRSRMKLWIIRATTSIFLWT
CLVQLTALSETRGLRVLKGWPSCFSQESAAAAALDAQSHLARVLPPKRVYKNNGYLMVSC
NGGLNQMRAAICDMVAIARYLNVTLVVPELDKTSFWNDPSEFEDIFDVDHFITSLRDEVR
ILKELPPRVKRRVELGIIYTMPPVSWSDISYYHNQILPLIQKYKVVHLNRTDARLANNDQ
PMDIQRLRCRVNFGALRFTPQIEELGRKVIKILRQNGPFIVLHLRYEMDMLAFSGCTQGC
GADEVEELTQMRYAYPWWKEKVIDSDMKRREGLCPLTPEETVLTLRALDIDRNIQIYIAA
GEIYRGERRLSSLRASYPNLVRKETLLDSSDLRYFQNHSSQMAALDYLVSLESDIFVPTY
DGNMAKVVEGHRRHLGYKKTILLDRKLLVELIDKYNSGSLNWDQFSTAVKDAHVERMGNP
TKRLVIPDRPKEEDYFYANPYECLETQSEDEPLELTSI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagattgaaggactgtgaagagagcaagcggaggcggaagtgggggataatgggg
ctcaaaacggcggcgtttgctggcgacaagctggagaagctgagaaacagcggcgtcgtg
tcgcgatcgaggatgaagctttggataatccgagctactacgtcgatttttctgtggact
tgcttagttcagctgacggcattgagcgagactcgggggcttcgtgttctgaagggctgg
ccgtcttgcttctcgcaggaatcggcggcggcggccgccttggatgctcagtcgcatcta
gcgagggttttgcctccaaagagggtttacaagaacaacgggtacttgatggtttcgtgc
aacggagggcttaatcaaatgcgggctgcgatatgcgacatggttgccattgcgagatat
ctaaatgttacattggtggttcctgaacttgacaagacttcgttctggaacgatcctagt
gagttcgaagacatatttgatgtggaccatttcattacatccttgagagatgaagttcgg
atactcaaggagctgcctccgagggtcaagaggagggtcgagctgggaatcatctatacc
atgccccctgttagttggtcagatatttcgtactatcacaatcagattcttccactgatc
cagaaatataaagttgtccatttgaacagaacagatgctcggcttgccaataacgatcag
cctatggacattcagaggctccgttgcagagttaattttggtgctttgaggtttacacct
cagatagaggaactgggcagaaaagtcattaaaattcttaggcaaaatggtccattcatc
gtgctccacctgagatacgagatggacatgctagccttctctggttgtacacagggttgt
ggtgcggacgaggtggaggaactaacacaaatgagatacgcctacccgtggtggaaagag
aaggttatagattctgatatgaaaaggagagaaggtctatgtcctttgacacccgaagaa
actgtcctcacgttacgggcactggacatagatcgtaatatccagatttacatagctgct
ggggaaatctatcgaggagaaagaagactttctagtctcagagcatcgtatccaaatctg
gtgaggaaggaaacattgttggactcttccgaccttaggtatttccagaatcactcgtct
cagatggcggctcttgattatcttgtttccctggagagtgatatctttgttcccacgtac
gatggaaatatggctaaagtcgttgaaggacatcgcagacatcttggatacaagaagacc
attctactcgacagaaagctgctagtcgaattgatagacaagtataactccgggtcactg
aactgggatcagttttcaactgctgtcaaagacgctcacgttgaacgcatgggaaacccg
accaagagattggtgattcccgaccgacctaaagaagaagattacttctacgccaacccc
tacgagtgtttggaaacgcagagtgaagacgaaccactagaactgactagtatttga
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