Salvia hispanica (chia): 125216324
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Entry
125216324 CDS
T09851
Name
(RefSeq) long chain acyl-CoA synthetase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00061
Fatty acid biosynthesis
shis00071
Fatty acid degradation
shis01100
Metabolic pathways
shis01212
Fatty acid metabolism
shis04146
Peroxisome
Module
shis_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125216324
00071 Fatty acid degradation
125216324
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125216324
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shis01004
]
125216324
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125216324
Enzymes [BR:
shis01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125216324
Lipid biosynthesis proteins [BR:
shis01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125216324
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of breast milk
125216324
Exosomal proteins of breast cancer cells
125216324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
125216324
NCBI-ProteinID:
XP_047973973
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Position
3:complement(12068054..12072272)
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AA seq
663 aa
AA seq
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MMKKKFTVIVEEGKKGRDGELSVGPVYRNPLSQHEYPPIEPESSTIWKIFISSVEKHSDN
RMLGWRELLNDKWGPYKWKTYRQVYEEVLQAGSALRAHGYEPGARVGIYGMNCPQWVVAM
EACSAHSLICVPLYDTLGPGAVNYILDHSEIDVVFVQDKKVKQLLNPECVHAQRLKLMVC
FTSFTEEQKEKTAAIGIQTYSWNDFLNKGKDNPCKVSPPEPDTICTIMYTSGTSGDPKGV
VLTHENVVTNIKGVDLFMEQFEDKMTTDDVYISFLPLAHILDRMIEEYFFHKGASVGYYH
GEINEIRDDLIELKPTFLAGVPRVFERIHEGVLKALEDLNWRRRGIFHLLYRYKLHWMNK
GYKQKDASPLADFIAFRKVKSRLGGRLRLIVSGGAPLSSEVEEFLRVTSCAFVTQGYGLT
ESCGLSTLGYPDEMSMVGAVGSTFVYTELRLEEVPEMGYDPLGEPSRGEICLKPKSPFVG
YYKNPELTQEAVIDGWFHTGDIGEMMPNGVIKIIDRKKNLIKLSQGEYVALEHLEKVYGI
TPIAEDIWVFGDSFKSMLVAVVVPNEENTTKWAQKNGYKGSFLDLCILDQLNEYILLELK
ATAERNKLRGFEYIKGVIIEPQLFELSEKELVTATLKKRRDRLLKLYKVEIDSLYKKLSG
SKS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaagaaattcacagtcatagtggaagaaggcaagaagggccgggatggggag
ctctccgtggggcccgtgtaccggaatcctctctcccagcacgaataccctcccattgag
ccggagtcctccactatttggaagattttcatatcatcggtcgaaaagcattccgataat
aggatgctaggatggcgcgagttgctgaatgataagtgggggccttataaatggaagact
tacaggcaagtgtatgaagaggttttacaagctggttctgctttgagggctcatggctat
gaacctggtgctcgagttggaatatatggaatgaactgccctcaatgggttgtggcaatg
gaggcttgtagcgcgcatagcttaatctgcgttcctctttatgacacactcgggccggga
gctgtcaactatatacttgatcattctgagatcgatgttgttttcgttcaagacaagaaa
gttaaacaactcctaaatccggaatgtgttcatgctcagaggctaaaattgatggtttgc
ttcacatcattcacagaggaacagaaggagaagactgctgcaattggtattcaaacatat
tcatggaatgattttcttaataaagggaaagacaatccgtgcaaggtgtcaccacccgag
ccggataccatatgcacgatcatgtacacgagtggcacgagtggtgatccgaaaggagtt
gttctgactcacgaaaacgtggtgaccaacataaaaggagtcgatctcttcatggagcag
tttgaagacaaaatgaccacggacgatgtgtatatatcgttcctgcccctcgctcacatc
cttgatcgaatgatcgaagagtatttcttccacaagggtgcttctgttggctactatcat
ggggaaatcaatgagattagggatgacttgatagagctgaagccgacgtttctggcaggt
gttccaagagttttcgagcgaattcatgaaggagtgttgaaagcacttgaagatctcaac
tggaggaggaggggaattttccacttgctttacagatacaagcttcactggatgaacaaa
gggtacaaacagaaggacgcgtcgcccttggccgatttcatagctttcaggaaggtcaag
agcaggctaggcgggaggctgcgtctcatagtctcagggggcgccccgttgagcagtgag
gtggaggagttccttagggtcacctcctgtgcttttgttacacaaggatatggtttaacg
gagagttgtgggctgtcgacccttggctacccggacgagatgtccatggtgggagcagtc
gggtcaacattcgtttacactgagctgcgactggaggaggttccagagatggggtatgac
cctctcggggagccttctcgtggcgagatatgccttaagcccaagtctccgtttgtcggt
tactacaagaacccggaattgacacaagaagcagtgatagatggatggttccacacaggt
gacataggagagatgatgcctaatggagtaataaaaatcattgataggaagaagaatctg
atcaagctctctcaaggagagtatgttgctcttgaacatcttgaaaaagtttatggtatt
acacctattgctgaagatatatgggtgttcggagatagcttcaagtcgatgctggtggcg
gtggtggttccaaacgaagaaaacacgacgaaatgggcacaaaagaatgggtacaaaggg
tcgtttttagacctatgcatccttgatcaactcaatgagtatattcttcttgagctcaag
gctacggccgagagaaacaagttgagaggatttgagtatatcaaaggtgtaattatagag
cctcagctattcgaattatctgaaaaggaattggtgactgcaacattgaagaaaaggaga
gacagactgctcaagctgtacaaggtggagattgactctctttataaaaaattaagtgga
tccaagtcataa
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