Salvia hispanica (chia): 125216391
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Entry
125216391 CDS
T09851
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
shis
Salvia hispanica (chia)
Pathway
shis03020
RNA polymerase
shis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125216391
09124 Replication and repair
03420 Nucleotide excision repair
125216391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125216391
03400 DNA repair and recombination proteins [BR:
shis03400
]
125216391
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125216391
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125216391
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
125216391
NCBI-ProteinID:
XP_047974042
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All DBs
Position
3:9715466..9718329
Genome browser
AA seq
319 aa
AA seq
DB search
MEGVSYQRFPKIKIREVKDDYMKFELRETDASIANALRRVMISEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLISERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDTTLDV
TSKDLYSSDHTVVPVDFSDASSTIDNTESRGIIIVKLRRGQELILRAIARKGIGKDHAKW
SPAATVTFMYEPEIYINEELMETLSMAEKQEFVDSSPTKVFDINPRNGQVYVHNAENYTY
DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQLLINAIEILKQKLDAVRLSA
DTVEADEQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtttcgtaccagagattccccaaaatcaaaattcgggaggtgaaggacgac
tacatgaagttcgagctgcgagagaccgatgccagcatcgccaacgccctccgccgcgtg
atgatctccgaggtcccaaccatcgctatcgatttggtggaaatcgaggtcaactcttcc
gtcttgaacgacgaattcatcgcccaccgcctaggtctgatccctctcatcagcgagcgc
gccatggccatgcgcttctcccgcgactgcgacgcctgcgacggcgatggccagtgtgag
tactgctccgtcgagtttcatcttcgcgccaagtgcattaacgacactacgctcgatgtc
acctcgaaggacctctacagctcggaccacacagttgttcccgtcgatttctccgatgct
tcgtccacaatcgataacacggagtctaggggaatcataattgtgaagcttcgccgaggt
caggagttgattttgagagccatagcacggaaaggaattgggaaagatcatgccaaatgg
tcgcctgcagcaactgtcactttcatgtatgaacctgagatctatatcaacgaagagtta
atggaaaccttgagcatggcagagaaacaagagtttgttgacagcagtcccacaaaagtg
tttgacattaacccccgcaatgggcaggtctatgtgcacaatgctgagaattatacgtat
gacgatgaagttctcaagaaagcagaagcaatggggaagcccggccttgttgagatccat
gccaaagaggacagtttcatattcacggtagagacaactggaggcataaaggcatcccaa
ttgttaatcaatgccatcgagatcctgaagcagaagctagatgctgttcgcttgtcagca
gacactgtggaagctgacgagcagtttggcgagctgggagcacatatgcgcgggggctga
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