Salvia hispanica (chia): 125216466
Help
Entry
125216466 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125216466 isoform X1
Organism
shis
Salvia hispanica (chia)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
HPIP_like
Motif
Other DBs
NCBI-GeneID:
125216466
NCBI-ProteinID:
XP_047974136
LinkDB
All DBs
Position
3:complement(39298139..39304717)
Genome browser
AA seq
1582 aa
AA seq
DB search
MPPEPLPWDRRDFRKHDRSASAVAGGLGRGGIHKWRDQHQQQPHRNHHAPPPYHQQQQQR
WYSDFRSLGQSKQGGWSMYSGDPGQGVAPFSSRFDRNLENERSQTFSTRGNGRYYKNNRG
SFTRKEWKGPSWEAAVPHNSTGETITEVNNPRSIEYIQPCHNSSSRSDRVSHAPLDSISV
SDQSLTESLVKEKVDNITDETTGKGQESEKENCLGPVELEPLKWSQVGSTCINHSTSSKS
LGQDSIEVLTEVQLKNAIPSKSLTVDVSCDRSNSPTQSEDTGSRKKRRLGWGEGLAKYEK
KKVDGPEDGTTKSESSISVVSTESPQSQSVNLVEKSARVERLLECASPATPSSVACSYSP
DVLEEKSAKEANMDCDASNVSCSPSTASLSHYAGSPINLQNLELESITNLSSLINELLQP
NDPCSAEYGDTQRISMDKLLVWKVDVLKALEITESEIESLETELKSSISHPAGPRTSVGE
QQSKPCELLDTASRYGVGHAVSKDVDTDSPGSATSKFVDVPAIFSPEKEEFSEDSRNVDV
DKSCNLDTKCLKNVSNSPESHGYVSSNVLTRNTIREDRDVGNIWGAILSSNRDASSRALE
EINKLLPKQCRFDGSVDSFFSSLPSNSSAVKERFLKRKQFLQFKEKVLVLKFKVFQHFWK
EGQVVSIKTLRGKTRKKFDPSRNGHKRHRSRVSSYAGGFQTVPADEVIDYVNNLLSQLAF
KPNRNTLKMPALILDKNVKMSRFITNNGLVEDPFTVEKERSIINPWATEERVIFIKKLAA
YGKDFRKIASFLDHKTVADCIEFYYKNHKSKWFEEARKNSGFIKQRKSQTTNYLVGSGKR
RNREFNAASLDMLGAASEIVANIDKGMDVRQKGVSRSSLGGASSSCAPPRVVDHLLKGSD
SKDMDNNDMETEAADVLAGICGSLSPETTSSSITSSVDLGDGYKDTSCPRISPSVKWPLT
PEVTEDVDSECSDESCGEMNSTDWSDEEKSIFIRAVSSHGKDFRMVSHCVRTKSANQCKV
FFSKARKSLGLDMVQLGSGAASGDVDGGGSDIEDDCNMGTYLGTSNNSSEYETKETSPPP
RMKSDHESEIVDMAPEVKTFEGNQGQCPLDSTTGELVLENSALVARGDDKPVKDVQYPQT
TAVALNMESRRGAKEEVPDWPNEAEKGALVKVSNGNGAEEKQCDVPLLPKVHLSDSTDVN
DTGHETCWKKFELSHTSVDTHSSTQTCKKFNTPKEANVGMCSAEKSSVSSLPQNGRLASV
ASTSIFSVPIKYSDTPNRNALLPVEANGNDGTHLSSYSLGSSQILQGYPLSLQTMKGTKR
DVSSARHGEHSNSDWHTDFSLQKCKEARKNDLSFPPPERVRDRSTPPQSSCSSAGDNNPP
RKGDVKLFGKILSSSLQKPVERAGESSSSQNQRLKLISEQKDSAQSKFDCNGYAPPEKMP
ARRFTLWDGNRIQTTPVPPMLDSARLLAKYPSAFSNFMPSSLHGPVDGTSVFQRREMCSS
IGVKQVQDDTLAEMQRRNTLNAAAGTSSGVGIAGQGRMMFGGEYPNLTDPVAAIKMHYAR
MQGGNIVFDTDGRWINSRDVGR
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgcctccggagccattgccttgggatcgaagggattttcggaagcacgacagatccgcc
tctgccgtcgccggaggattgggccgcggcgggattcacaaatggagggaccagcaccag
cagcagccgcaccgcaaccaccacgctccgcctccatatcatcagcagcagcagcagcgg
tggtattctgatttccgctcccttggtcagagcaagcagggtggttggtctatgtattct
ggtgatcctggccaaggcgttgcgccttttagttcacggtttgatagaaatttggaaaat
gaacgtagccaaacctttagcacccgtggtaatggaaggtattataagaataataggggt
tcctttacccggaaagagtggaaaggcccctcttgggaagctgctgtaccacataattca
actggagaaactatcactgaagtaaacaacccgaggtccatagaatacatccaaccatgc
cacaatagcagcagcagaagcgacagggtctctcatgccccgcttgattctataagtgta
tcagatcaatccctaactgaatctctcgtgaaggagaaagtggataacattactgatgag
acgactggtaaaggtcaagaatctgaaaaagagaactgcttggggccagtagagttggaa
cctctaaagtggagccaggtgggcagtacatgtatcaatcattctaccagctcaaagagt
ctagggcaggattctattgaggttctgactgaagtgcagctgaagaatgcaattcccagc
aagtctcttactgtagatgtttcttgtgatagatcaaatagtcccacccaatctgaagat
actggatctaggaaaaaaaggcgccttggttggggtgagggactggcaaagtatgagaag
aagaaagtcgatggccctgaagatggtactaccaaaagcgaatcctctattagtgtcgtt
agtacagaatcacctcagtctcaatccgtcaacctggttgagaagagtgcaagagttgaa
agattgttggagtgtgcctcacctgctactccatcttcggttgcttgtagttattcacca
gatgttctcgaagaaaaatctgccaaggaggcaaatatggattgtgatgctagtaatgta
agctgttctcccagtactgcatccctgtcacactatgctggttcacctattaacttacaa
aatttggagcttgaatctattacgaatttgagctctttgataaatgaattactacagccc
aatgatccatgttctgcagaatatggtgatactcaaaggatatccatggataagttgttg
gtatggaaggtagatgtattgaaagcacttgaaattacagaatctgagattgagtcactt
gaaacggaactgaagtcatcaatatctcacccagccggtcccaggacatcggtaggagag
cagcaatcaaaaccttgtgaattgctagatactgcttccagatatggtgttgggcatgct
gtgtccaaagatgtggatacggatagcccaggcagtgctacgtcgaaatttgtggatgtg
cctgccatcttttcacctgagaaagaagaattttcagaagattctagaaatgtggatgtg
gacaaatcttgcaacttggatacgaaatgtttgaagaatgtttccaattctcccgaaagc
catgggtatgtcagtagtaatgtacttactaggaatactattcgtgaggatcgcgacgtg
ggcaatatttggggcgcaatactctcttccaatagggatgcttccagcagagctttggag
gagataaataagttactgcccaaacagtgccgttttgatggttctgttgattctttcttc
tcttctttgccaagcaattcctctgcagttaaggaaagatttctaaagaggaagcaattt
ctccagttcaaggagaaggttttggtcctcaagtttaaggtatttcaacatttctggaag
gaaggccaagtagtttctatcaagacacttcgagggaaaactcggaagaagtttgatcca
agtcgaaatggccataaaagacatcgttctcgagtttcttcttatgctggaggttttcaa
acagttcctgccgatgaagtgatcgactacgtgaacaatttgctttcacagttggcattc
aaacccaataggaatactctgaagatgccagctttaattttggacaagaacgtgaagatg
tcaaggtttatcacaaacaatggtcttgtcgaagatccttttactgttgaaaaagaaagg
tctatcattaacccgtgggcaactgaagagagagtaatttttatcaaaaagcttgctgcc
tacgggaaggatttcaggaagatagcatcttttctggatcataaaaccgtggcagattgc
atcgagttctattacaaaaatcacaagtcaaaatggtttgaggaagctagaaagaattcc
ggcttcatcaagcaaagaaaatcccaaacaacaaattaccttgttggttcggggaaaaga
aggaatcgtgagttcaatgctgcttctcttgatatgttgggtgcagcttctgagattgtg
gctaacattgataagggcatggatgtccggcagaaaggcgtatcaagatcctctcttggt
ggtgcatctagttcttgcgccccccctagggtcgttgatcatctgttgaaggggtctgac
agtaaggatatggacaacaatgatatggagacagaagctgctgatgtgttagctggcatt
tgtggctccttatcgcctgagactacgagttcttccatcacaagttctgttgaccttggt
gacggttacaaagatacgagctgtccacgaatcagtccgtctgtaaaatggcctttgacc
cctgaggtcactgaggatgttgatagtgagtgctcggatgagagctgcggcgaaatgaat
tcaactgattggtcagatgaggagaaatccatcttcattcgggccgtgtcatctcatggg
aaagattttcgtatggtctctcattgtgtccgaacaaaatctgccaatcagtgcaaggtg
ttctttagcaaggctagaaagtcccttgggttggatatggttcagcttggctctggagct
gcatcaggtgatgttgatggaggtggtagtgacatcgaagatgattgtaatatggggact
tacttgggcactagcaacaacagctcagaatacgagacaaaggagacttccccaccacct
cgcatgaagtctgatcatgaatctgagattgtggatatggctcctgaagttaaaacattc
gaagggaatcaaggacaatgccctcttgattctacaactggtgaactggttctagagaat
tcagctttagttgctcgtggggatgataagccagttaaagatgtccaatatcctcaaact
acagctgttgccttgaatatggagtccagacgaggggctaaagaagaagttccagactgg
ccaaatgaggctgagaagggggctttagttaaggtctcgaatggcaatggtgctgaagaa
aaacaatgtgacgtacctcttttacccaaagttcatttatctgattctactgatgttaat
gacacaggccatgaaacatgctggaagaaatttgagctttctcatacctctgttgataca
cattcttctacacaaacttgtaagaagttcaataccccaaaagaggccaatgttggaatg
tgttctgctgaaaaatctagtgtcagctcgttgccacagaatggccgcttagcatccgtg
gcttcaacatcaatattttcagttcctattaaatacagtgatactccaaaccgcaacgct
ttactacctgttgaggctaatgggaatgatggaacacatctttctagctactcgttggga
tcttcccagattctccaggggtaccccctttccttgcagactatgaaagggacaaagagg
gatgtcagctctgctcgtcatggtgaacattcgaattcagattggcatacagatttctca
cttcagaagtgcaaggaagcaaggaagaatgatctctcgtttccacctccggaacgagtc
agggatcgttcaactccaccgcaatcaagctgctcatctgctggtgacaacaatcctccg
agaaaaggtgatgtgaaattgtttggtaagatcttatcatcttccctgcagaaacccgtt
gaacgagctggtgagagtagcagcagccagaatcaaagactcaaactcatttccgagcag
aaggattctgcccagtcaaagttcgactgcaatggctacgctccccctgagaagatgcct
gctaggagattcacgctttgggatggaaacaggatacagacaacaccggtccctcccatg
ctggattctgctcgcctgctggccaaatacccctctgcatttagcaatttcatgccatct
tcgttgcatggccccgttgatggcacttctgttttccaaagaagagagatgtgcagtagc
attggtgtgaagcaggtacaagatgatacgctggctgaaatgcagagaagaaacacactc
aatgcagctgcaggaacatcgtcgggtgttggcattgctggacaaggaaggatgatgttt
ggaggtgagtatcctaaccttacagatccagtggcggccatcaaaatgcactatgctagg
atgcagggaggtaacatcgtcttcgacaccgatggtagatggattaacagtagggatgta
ggcaggtag
DBGET
integrated database retrieval system
