KEGG   Salvia hispanica (chia): 125216551
Entry
125216551         CDS       T09851                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125216551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:shis03036]
    125216551
   03400 DNA repair and recombination proteins [BR:shis03400]
    125216551
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    125216551
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     125216551
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 125216551
NCBI-ProteinID: XP_047974251
LinkDB
Position
3:55984391..55986584
AA seq 453 aa
MEVHIHSRTSYCVSASKIESRKRNKSKEEEMNTSKKRKDRIEGISEEHNLYILALPSQSS
ESRHVSKVNKRIESFSKEVPKHLEKDKHEIVISPYFKEKEQVFGDQLEDISPYFKEKEQV
LGDQLENSGGAVKCSFDDMLSRFMYTNGKLHNSPAKSSLSEIEHVQGARIVSPYFAKQSE
SVTLRKGARIVSPYFEKQSKNVPRRKGARIVSPYFEKQSKSVLRRKGARIVSPYFAKQSK
SVPQRIGARVVSPYFAKKFLVSPCPFHKALAAQKARKRLQRKAAATLTAAQKRDEAYERK
TPENTWTPPRSPFHLMQEDHVFDPWRVLVICMLLNLTTGVQARRVLPDLFQICPDAKTAM
TVNVDYVADLIHSLGLQKKRAVMIQRLSAQYVTESWTHVTQLIGVGKYAADAYAIFCTGK
WERVKPVDHMLVKYWEFLSKLYANPVPQAAPTV
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggaggtacacattcattctcgaacctcttattgtgtttccgctagtaaaattgaaagt
aggaagagaaacaaatcgaaagaagaagagatgaacactagtaaaaaaaggaaagatagg
atagaaggtattagtgaagaacataacttgtacatcctagcccttccgtctcaatcgtcc
gagagcagacatgtatcgaaagtgaataagaggatagaaagctttagtaaggaagtcccc
aaacatttggaaaaggacaaacatgaaattgttatttccccttattttaaggaaaaagaa
caagtttttggtgatcaattggaagatatttccccttattttaaggaaaaagaacaagtt
ttaggtgatcaattggaaaattctggcggtgcagttaagtgttcctttgatgatatgctc
tcaagatttatgtatacaaatggcaaactgcacaactctcctgccaagtcttctttaagt
gagatagagcatgttcaaggagcaagaattgtttcaccttattttgcaaagcaatcagag
agtgttactctgaggaaaggagctagaattgtttcaccttatttcgaaaaacaatcaaag
aatgttcctcggaggaaaggagctagaattgtttcaccttatttcgaaaaacaatcaaag
agtgttcttcggaggaaaggagctagaattgtttcaccttatttcgcaaagcaatcaaag
agtgttcctcagaggataggagctagagttgtttcaccttattttgcaaagaaatttctt
gtatctccttgcccatttcacaaggcacttgcagcccaaaaggctagaaaaagacttcaa
agaaaagcagctgctaccctcactgctgcacagaaacgggatgaagcttatgaaagaaaa
actccagaaaacacttggactcctcctcgttcgccctttcatctcatgcaagaagatcat
gtttttgatccttggagggtattagttatttgtatgcttcttaacctaactaccggagta
caggctagaagggtattgccagacttatttcaaatttgtccagatgccaagactgcaatg
acggttaatgtggactatgttgctgatctaatacacagcttaggtttgcaaaagaagaga
gcagtcatgattcagcgattatctgcacaatatgtgactgaaagttggacccatgtaaca
caattgattggtgttggcaagtatgcagctgatgcttatgcaatattttgtactggaaag
tgggaacgcgtcaaaccagtcgatcatatgctggtaaaatactgggaatttctcagtaag
ttatatgcaaatccggttcctcaagctgctcctactgtttaa

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