Salvia hispanica (chia): 125216628
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Entry
125216628 CDS
T09851
Name
(RefSeq) dual-specificity RNA methyltransferase RlmN isoform X1
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125216628
Enzymes [BR:
shis01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
125216628
Ribosome biogenesis [BR:
shis03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
125216628
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-GeneID:
125216628
NCBI-ProteinID:
XP_047974339
LinkDB
All DBs
Position
3:29844065..29847276
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AA seq
442 aa
AA seq
DB search
MEMTLSRGQWMRRHLATLCFPSSSSLTPLRFLPIANSNARFLSFSAAATLQSNVPLNPKV
NLECDGGMEIPIKGSMVLLKGMRYHELEKWVQSHGYRPGQAMMLWKRLYGNNIWAHCHEE
LEGLNKDFKKMLSAHAEFKALHLKDMISASDGTKKILFTLEDGLVIETVVIPCPRGRTTV
CVSSQVGCAMNCQFCYTGRMGLKRNLSAAEIVEQAVFARRLFSHEVGNITNVVFMGMGEP
LHNIENVLKAADIMVDEQGLQFSPRKVTVSTSGLVPQLKRFLKESNCALAVSLNATTDEV
RNWVMPINRKYNLELLLGTLREELRLKRHYKVLFEYVMLAGVNDSVEDAKRLINLVQGIP
CKVNLISFNPHCGSNFKPTTDEKMIEFRNILAKARVVVFVRPSRGDDQMAACGQLGKPGE
IQAPLLKVPLKFRPVLDSSLSA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacgctcagccgcgggcagtggatgaggcggcacctcgcaaccctctgcttc
ccttcctcttcctctctcacaccactccgctttctccccatcgccaattccaatgcccga
tttctctctttctcagctgctgccactctccaatccaacgtccccctcaaccctaaagtt
aacttagagtgcgacggaggtatggaaattccaatcaagggttccatggtgcttttgaaa
gggatgagatatcacgagcttgagaaatgggttcagtcgcatggctacaggcctggtcag
gctatgatgttatggaaacgcttgtacggaaacaatatctgggctcactgccatgaagaa
ttagaaggtttgaacaaggatttcaaaaagatgttaagtgcacatgctgaattcaaggca
ctacacttaaaggatatgatttcagcttcagatggaaccaagaagatactgttcactttg
gaggatggactagtgattgaaaccgttgtgattccttgtcctagaggccggactacagta
tgcgtttctagtcaagtggggtgtgccatgaattgtcagttttgttacaccgggagaatg
ggactgaaaagaaatttatctgctgccgagattgtggagcaggctgtgtttgcaaggcga
ctgttctcacatgaagttggtaacataacaaatgttgtattcatggggatgggcgaaccg
cttcacaacattgagaatgttctaaaagctgctgacataatggtagacgagcaaggtctt
caattcagtcctcgtaaggttactgtctcgactagtggtcttgttccacaattaaagcgt
ttccttaaagaatccaactgtgcattagctgtcagtttgaatgctaccacggatgaggtc
agaaattgggtcatgccaatcaaccgcaagtataaccttgagctacttcttggtacactt
cgggaggaacttcgcttgaaacgccactacaaggtcttattcgaatatgtaatgcttgct
ggagtgaacgacagtgtcgaagatgctaagcggttgatcaatcttgtccaaggcattcct
tgcaaggtcaatctaatatctttcaatccccattgtgggtcaaactttaagccaaccaca
gacgagaagatgatagagttccgcaacatacttgcaaaagcaagagtggtggtcttcgta
cgacccagcagaggcgatgatcagatggccgcctgtggccagcttggcaagccgggtgaa
atccaggctcccttgctcaaagtcccacttaagtttcggcctgtgctggattcttcgctc
tcagcgtag
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