Salvia hispanica (chia): 125216679
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Entry
125216679 CDS
T09851
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125216679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125216679
03036 Chromosome and associated proteins [BR:
shis03036
]
125216679
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125216679
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125216679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_ACSF4
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
125216679
NCBI-ProteinID:
XP_047974394
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Position
3:complement(9034939..9038004)
Genome browser
AA seq
347 aa
AA seq
DB search
MSGNGAASTIANPNRSTQVVKPPSDSVSSLSFSPKANVFVATSWDNQVGCWEVQKSGNEL
STVHMGSMSHDKPVLCSAWKDDGTTVFSGGCDKQVKMWPLASGGQPVTVAVHDAPVKEVS
WIPEMSLLVTGSWDRTLRYWDLRQQSPTWVQQLPDRCYALAVQHPLMVVGTADRNIIVFD
LQKPQTEYKRFFSPLNHQTRCLAAFPDKQGFLVGSIGGRVGVHHFDKPQTDKTFTFKCHR
QGSVVYSVNSLNFHPTHHTFATTGSDGSFSFWDKDNKTRLKEMARCNQPVTCSSFNHDGS
IFGYSVCYDWSKGAEKYDPATAKTNIYLHQPLEVDVKPRLPLARGRR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaatggcgcggcgtcgaccatcgcaaaccccaaccgttccactcaggtggtt
aaacctcctagtgattcggtttccagcctaagcttcagccccaaagcaaacgttttcgtg
gctacttcttgggataatcaggttggatgttgggaggtgcagaagtctggtaacgaactc
agcactgttcatatgggatcaatgtcacacgacaagccggtgttgtgctctgcttggaaa
gatgatgggacaactgtgttttctggagggtgtgacaagcaagttaagatgtggccgtta
gcatcgggtgggcagcctgttacagtggccgtgcatgatgctccggttaaagaagtttct
tggatcccggagatgagtctcttagtcaccggaagctgggacaggactctgaggtattgg
gatctgagacagcaatctccaacttgggtacaacaacttccagatcgctgctatgcactg
gcagttcaacatcctcttatggttgttgggactgctgacagaaatataatcgtctttgat
ttgcagaaacctcagactgagtataagagatttttctcacctctcaatcaccagactagg
tgtttggctgcttttcctgataagcaaggtttcttggttggttcaatcggaggaagagtt
ggtgtgcatcattttgataagccgcagacagataaaacttttactttcaagtgtcacagg
caaggcagtgtggtttactctgtcaactcgctaaactttcaccctacacatcacacattt
gctaccactggatctgatggaagcttcagtttttgggacaaggataataagacgaggctc
aaggaaatggcacgatgcaatcagccagtaacttgcagcagttttaaccacgatggttct
atctttggatattcggtttgttatgactggagcaagggggccgaaaaatatgatccggca
acagcaaagaccaacatatacctccaccagcctctggaagtggatgttaaacccagactc
cctttagcaagaggaagaaggtga
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integrated database retrieval system