Salvia hispanica (chia): 125216889
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Entry
125216889 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125216889
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125216889
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125216889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
125216889
NCBI-ProteinID:
XP_047974631
LinkDB
All DBs
Position
3:2420621..2444200
Genome browser
AA seq
2500 aa
AA seq
DB search
MEDKDTELLSRVAANHLFLGQFEPFRATVRSLRARNPDLARTILQTVVSRGGRLGTPDPV
TWSDPCPSPADLTFFCTVELLQFLDATSNLWSFDPNMLKLRSEFLLYVHIVSSRIQRTIE
GGVIRNLDEDSVRNEELRVLDLLTQLGLSRLRPDLDDSGEPEGLGFRGLGEAELMVLRGS
ILENSDIYDVLCANIGEQVGCVEAEDSGGLAIALRNGGRQGEEKDEEVLRLVQKCVQTTH
MDAMKQCLENSDVDGAISHVRFLHLNRGVEEAEYRMVLRDLLKRVLSGIHDYGDTSRAIQ
NKVFSIYTEAISSQCTHLVRMLQFIQDELLSQEIEAYSASEGDQIPLPLLRLHKFIAQLT
PDTVSAETPVTLKVATSLCMRDMCHYARIRGLHVLGCVMDTALSLVRTEQIQEACQILML
FPRLQPLVAALGWDLLAGKTTIRRELMQSLWASKSQALRLEESSPYDNKLDEVSCVENLC
DTLCYRLDIASFVACNNSGQPWSLKSSILLSGKDIEQRYENAQFDPFVENFVLERLSVQS
PLRVIFDLVPQIKFQDAIELLSMQPITSTPDAWKRMQDVELMHMRYALESALLALGAMER
STTDGMGDQQMAFYCLKELKNHFDAITSTARKIYTVNIIISLLYMDNLQIDLTPYDLMRR
LSKSFNSRGGLQVDVISREGGNEMVVSFTGQVLNILRQQLPLSISDLDNSLDGHISAGSK
QALEWRILTAKRFIEDWEWRLSVLQRLLPLSERQWRWKEAQTVLRAAPSKLLNLCMQRAK
YDIGEEAISRFSLPPEDKATLELTEWVDAAFNKTSVEDVVSRAADGASAQELDLLSLRSQ
LGPLAAILLCIDVAAGCSRLPNVSSKLLNQAQVMLSEIYPGSAPKTGPSYWDQIREVAII
SIVKRVLRRLSELSEQDKPTALQALLSGEVILSSSIEFHRQGNRDRALVMLHQMIDDAHQ
GKRQFLTGKLHNLARAIADEEAERDHANGEGSNSDGRGLPGFDKNWVLGLGLRPSKPPPL
ASESGESNANSASYDVKNSEKRFFGPFGPKSTTFLSQFILHIATIGDIVDGTDTTHDFNY
FSVVYEWPKDLLTRLVFERDSTDAAAKVAEIMNSDFVHEIISACVPPVYPTRSGNGWACI
PVIPTLPRSYTESKVLSPSSREAKPKFYTRSSATPGVPLYPLKLDLVKHLVKLSPVRAVL
ACVFGSTMLHCGSDPAISSSLNDGLLPAPDVDRSFYELALDQSERFPTLNRWIQMQTNLH
RVSEFAVMTEHGTDDVKDNAEPKTAVKRFRDIESDSEPESDDMAVSNNISLSLPEVMDQS
NATSDAWHESPKSRTAADVNTVYLSFDWENEAPYEKAVERLIDEGKLLDALALSDRFLRN
GASDHLLQMLIVRAEDDAIAQQTQSSSALRIWSNSWQYCLRLKDKQLAARLALKYLDRWE
LEAALDVLTMCICHLPDGHRLKSEVIQRRHALCRYKHILCADDRYNSWQEVEIDCKEDSE
GLALRLAEKGAVSAASEVAQSAGLSIELRRELQGRQLVKLLNADPVNGGGPAEASRFLSS
LPDPDDALPVAMSAMQLLPNLRSKQLLVHFFLKRRHGNLSEVEVSRLNAWALGLRVLASL
PLPWQQRCSSLHEHPQLIVEVLLMRKQLQSASQILKEFPLLRDNKTIIAYAAKSIAISMT
SPARDSRVLVSGTRPKQRSKAATSTRSSFSSSLSNLQKEARRAFSWTPRNAGDKGALKDS
QRKRKNPGVAQSEKGTLEAMSGIQEDRVSVFTADGQERLPSALIATEWMLTGDPEKDEAV
RSSHRYDSAPDIILFKALLSLCSDESISGRGALDLCMNQMKVVLSSQQLPENASMEAIGR
AYHATEIFVQALLFAKSQLRKVSGATDLSSNSEKSRDADDASSDAGSSSVGSQSTDELSE
ALSQVDIWLGRAELLQSLLGSGIAASIDDIADKESSAHLRDRLVQEERYSMAVYTCKKCK
IELFPVWNAWGHALIRMEHYAQARVKFKQALQLYKGDSTTVILDIINTIEGGPPVDVASV
RSMYEHLAKSAPAVLDDPLSADSYLNVLYMPSTFPRSERSRRFQEAAKDNSSHNPLFEEG
PRSNLDSVRYLECVNYLQEYARQHVLSFMFRHGRYKEGCLLLFPANSVPNSSQTSSMGVV
TSTSSPQRPDPLATDYGTIDDLCDLCVGYGAMPVLEEVISSRILTTQDELVNQHTAAAVS
RICLYCETHKHFNYLYMFQVIKKDHVAAGLCCIQLFMNSASQEEAIKHLENSQMHFDEGL
SARSRFRDSTKLVTKGIRGKTAKEKLSEEGLVKFSARVAIQINVVRSFTDAEGPVWKHSL
FGNPNDLETFRRRCEIAETLVEKNFDLAFQVIYEFSLPAVDIYAGVAASLAERKKGGQLT
EFFRNIKGTIDDEDWDQVLGAAINVYANRHKERPDRLIDMLTSSHRKVLACVVCGRLKSA
FQIASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaagacaccgagcttctctctcgagttgccgccaaccacttattcctgggc
caattcgagccgtttcgggccacggtgcgcagcctccgcgctcgaaatcccgacctggcc
cgaaccattctacagacggtcgtctcccggggcgggcgcctcggcacgcccgacccggtc
acgtggtccgatccatgcccctcccccgcagacctcaccttcttctgcaccgtcgaattg
ctccagttcctcgacgctacctccaatctatggtcgttcgaccccaatatgctgaaattg
cgatccgaatttttgttgtatgtacatattgttagttctaggattcagcgaacaattgaa
ggcggtgtgattaggaatttggatgaggacagtgtgaggaatgaagagctgcgggttttg
gatttgcttacgcagttggggttgagccgtttgaggccggatttggatgactctggggag
ccggaggggttaggttttaggggactgggtgaagcggaattgatggtcttgagggggtcg
attttggagaattctgatatatatgatgtgttgtgtgctaatattggagagcaagtgggg
tgcgtggaggccgaggattcggggggtttggcgattgctctgagaaatggagggaggcag
ggtgaggagaaagatgaggaggtattgaggttggttcagaagtgtgttcagacaacacat
atggacgccatgaagcagtgcctggagaatagcgatgtggatggtgctatttcacatgtt
aggtttcttcatttgaaccgaggggttgaagaggctgagtaccgcatggttttgcgagat
cttcttaagagggtgttgtcaggaatacatgattatggagacacctcacgagccatacag
aataaagtgttttccatatacacagaagcgatttcgtctcaatgcactcatcttgttcgg
atgcttcagtttatccaagacgaactactctctcaagaaattgaggcttacagtgcttca
gaaggcgaccagatccctctcccccttctgcgccttcacaagttcattgcacaattgacg
cctgacacagtgtcagctgagacaccagtgactttgaaagttgcaacttcgctttgcatg
agagacatgtgtcactatgctcgtattagaggcttgcatgtacttggatgtgttatggat
actgctctgtctcttgtgcggacagaacagatccaagaagcttgccagattcttatgctc
tttccccggcttcaacccctggtagctgctttgggatgggatcttctagctgggaagaca
acaattagaagggaactgatgcagtctttgtgggcaagtaaatcccaagctcttcgattg
gaagagtcctctccatatgataataaattggatgaggtgtcctgtgtagaaaatctttgc
gatacactatgctaccggcttgacattgcttcttttgttgcttgtaacaattctggtcaa
ccgtggagtctaaaatcctcaatactattatctggaaaagacatagaacagcggtatgaa
aatgctcaatttgatccattcgtggaaaacttcgtactggagagattatcagtccagagc
ccccttagggtgatattcgatttagttcctcaaataaaatttcaagatgcgattgaactc
cttagcatgcagcctattacttccactccagatgcttggaagaggatgcaagatgttgaa
cttatgcacatgcgatatgctctcgaatctgctcttcttgcacttggagctatggaaagg
agtacaactgatggaatgggagatcagcaaatggctttctattgtttgaaagaactgaag
aatcattttgatgcaatcactagtactgcccgcaagatatatacagtgaacataataatc
tcactactatacatggacaatctacaaattgatttgacaccttatgacctaatgagaaga
ctatccaagtcatttaattctcgtggtgggctacaagttgatgtaataagcagagaaggg
ggaaatgagatggttgtctcctttacaggacaagtactaaatattttgcggcagcaacta
ccattatcaatatctgatctggacaattccttggatggccatatatctgctggaagtaaa
caagctttagaatggagaattttgacagcaaaacgtttcattgaagactgggaatggcgc
ctttctgttttgcaacgtctccttccgttatctgaacgccagtggaggtggaaggaggct
cagacagtgcttcgtgctgccccatctaagctacttaatctttgcatgcaacgggcaaag
tatgacattggagaggaagctatttctcgattctctttacctccagaagacaaagccaca
ctggaattgactgaatgggtggatgctgcattcaacaagacatctgtggaggatgtggta
tcacgtgctgctgatggtgcttctgctcaggaattagatctcttgtcgttgcgctctcag
ttgggacctttggcagcaatccttttatgcattgatgtagctgcaggttgttcgcggttg
ccgaatgtgtcttcgaagcttctgaatcaagcccaagttatgctttctgagatctatcct
ggtagtgctccaaagacaggaccaagttattgggatcaaattcgtgaagtggccataatt
tctattgtgaagcgtgtccttaggcgcttgtctgagttatcagaacaggacaaacccaca
gctctccaggctcttttatcaggtgaagtgatcctgtcatcatcaattgagtttcacaga
caaggtaacagagatcgggctcttgttatgcttcatcaaatgattgatgatgctcatcag
ggcaagcgacagttccttactggtaaactacacaatttagctagagctattgctgatgaa
gaagcggaaagagaccatgctaacggtgagggctcaaattctgatgggagagggcttcca
ggttttgacaagaattgggttctggggcttggtttaagaccctcaaagccgccacctttg
gcttcagagtctggagaaagtaatgcaaattctgcaagttatgatgtaaaaaattcagaa
aaaagattctttggtccctttggtcccaagagcacaacattcctttctcagttcattctc
cacattgccacaatcggtgacattgtcgatgggacggacaccactcatgacttcaactac
ttttcagtagtttatgagtggcccaaagatctcttaactcgtttggtatttgaaagagac
agtaccgatgcagctgctaaggtagcagaaataatgaattcagattttgtccatgaaatc
atttctgcatgtgtacctccagtataccctacaagatctgggaatggttgggcttgcatt
ccagtaattcccactctccctaggagttatactgaaagcaaggttctctcaccctcttct
cgagaagctaaaccaaagttctacacacgttcttctgccactcctggggtcccattgtat
cctctgaagctggatttagtgaagcatcttgtcaagttatctcctgtcagggctgtcctg
gcatgtgtgtttggaagtactatgttgcactgtggcagtgatccagcaatttctagttcc
ttaaatgatggcttattaccggctcctgatgttgataggtccttctatgaattggctctt
gatcagtcagagaggtttccaaccttgaatcgctggatacaaatgcaaactaaccttcat
cgagtttctgagtttgctgttatgactgaacatggaacagatgatgtgaaagataatgca
gaacccaaaactgctgtgaagcggtttcgtgatattgagagtgattctgaacctgaaagt
gatgatatggctgttagtaataacatttcgctgtcattgcctgaggttatggaccaaagc
aatgcgacatctgatgcctggcatgaatctccaaagtctagaacagctgcagatgttaat
acggtatacctttcttttgattgggagaatgaagcaccttatgaaaaagctgtagagaga
ttgattgatgaaggaaaattgctggatgctcttgctctttcggaccgcttcttacgcaat
ggggcctcagaccatttgcttcagatgcttattgtaagggccgaggatgatgcaattgca
caacaaactcaaagtagttcagcccttcgtatctggagcaatagttggcaatattgtcta
cgcctgaaggataagcagctggcagctagacttgctctgaaatatctggataggtgggag
ctggaagcagcattggatgttctcactatgtgtatctgccatttgcctgatggtcatcga
cttaaatctgaggttattcagagaagacatgcactctgtagatacaaacatattttatgt
gcagatgatcggtacaatagctggcaagaggtagagatagattgtaaagaagattctgag
ggtcttgcacttagattggctgagaaaggagcagtatctgctgcttcagaagtggctcaa
agtgcaggactttctatcgaacttcgtagagaacttcaagggcgtcaacttgtcaagctt
ctcaatgctgacccagtaaatggtggaggccctgcagaagcttcacgatttctatcttct
ctccctgaccctgatgatgctttgcctgttgcaatgagtgcaatgcagcttttgcccaat
ctcagatcaaaacagcttcttgtgcacttcttccttaaaaggagacatggaaatctatcc
gaagttgaggtttcccggttaaatgcatgggctttaggtcttcgtgttttagcttctttg
ccattgccatggcagcaaagatgttcatcgctacatgaacaccctcagttgattgtagaa
gttctactgatgcggaagcagctgcaatctgcatctcagatccttaaagagtttcctctc
ttgagagacaataaaacgataattgcatatgctgccaaatctattgctattagcatgact
tcccctgccagggattccagagttttagtttctggtacaagaccaaagcagagatcaaag
gctgccacatcgacacggtcatcattcagtagtagcctaagtaacttgcaaaaagaggca
cgcagagcattttcctggactcctcgtaatgcaggagataagggtgcattaaaggatagc
caaaggaagagaaagaaccctggagtggcacaatcggaaaaaggtactttggaagcaatg
tctggcatccaggaagaccgggtttcagtgttcaccgcagatgggcaagaaaggcttcct
tctgctttaattgcaacagagtggatgcttacaggtgaccccgaaaaggatgaagctgtt
cgttcttctcatcgatatgacagtgcccctgacattattctattcaaggcattgctttcg
ttatgttcagatgaaagtatatctggtagaggtgctttggacttgtgcatgaatcagatg
aaagttgttttgagctcccagcagctacctgaaaatgcatctatggaagccattggccga
gcatatcatgcaacagaaatatttgtgcaggccctgctttttgctaaatcccagctcaga
aaagtttctggggcgactgatttgtctagtaattctgaaaaaagcagggatgctgacgat
gcatcttcggatgctggtagctctagcgtgggtagtcaatcaaccgatgaactttcggag
gcactatcacaggttgatatatggcttggacgtgctgaacttttgcaaagtcttttggga
tcagggatagctgcttccattgatgatattgctgataaagagtcatctgcacatcttagg
gaccggttggtccaagaggaacgatacagtatggctgtatatacatgcaagaagtgtaag
attgagctctttcctgtttggaatgcatggggccatgccctgattcggatggagcactac
gcacaagctcgtgtaaaattcaagcaggctcttcagttgtacaagggtgattctactaca
gtgatactagatatcattaatactattgaaggaggccctccggtcgatgtggcatccgtc
cgatccatgtatgaacatttggcaaaaagtgcaccagcggtcttagatgaccctctttcg
gctgattcctatctcaatgtcttgtacatgccttctactttcccacgttcagagagatcc
aggaggttccaggaagccgcaaaggataattcgtcgcataatccactttttgaagaggga
ccaagaagcaaccttgacagtgttagataccttgaatgtgtaaactatttgcaagaatac
gctcggcagcatgtactaagctttatgtttaggcacggacgatataaggagggttgcctc
ttactttttcccgccaactctgtgccgaattcatcgcagacatcatctatgggagtggtt
acttcaacttcttcccctcaaagacctgatcctttagcaactgattatgggacaattgac
gatttatgtgatctttgtgttggttatggtgccatgcctgtcctggaggaagtgatatca
tcaaggattttgacaacacaggatgagttggtgaatcagcatactgctgcagcagtttcc
cgaatttgtctttattgcgaaactcataagcatttcaattatttgtacatgttccaggtg
atcaagaaggaccatgtagccgctggcctatgctgtattcagttgtttatgaactctgct
tctcaagaggaagctattaagcacttggaaaattcacagatgcattttgacgaagggcta
tcagcaagatctagatttagagattccacaaaacttgtcaccaaaggcatccggggtaaa
actgctaaagagaagctaagtgaagaaggactagtcaaattttctgctcgtgttgctatt
cagattaatgtggtgagaagcttcactgatgctgagggacctgtatggaaacactctctt
ttcgggaatccaaatgacctggagacattcaggagaagatgtgaaattgccgaaactctt
gttgagaaaaatttcgacttggcattccaagtaatatatgaattcagtcttccagctgtt
gacatatatgctggagttgctgcatcacttgctgaaaggaagaaagggggtcaattaact
gagtttttcagaaacattaagggtaccatagatgatgaagattgggatcaggtcttggga
gcagctattaatgtgtatgccaacagacataaggaacgccctgatcgcctcattgacatg
ctgactagtagccacaggaaagtacttgcttgtgttgtctgtggccgactaaaaagtgct
ttccagatagcatctagaagtggaagtgttgctgatgttcaatatgtcgcacatcaggca
ttacatgccaatgcacttccagttcttgacatgtgcaaacagtggttggctcaatacatg
tag
DBGET
integrated database retrieval system
