KEGG   Salvia hispanica (chia): 125217082
Entry
125217082         CDS       T09851                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03030  DNA replication
shis03410  Base excision repair
shis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125217082
   03410 Base excision repair
    125217082
   03420 Nucleotide excision repair
    125217082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shis03032]
    125217082
   03400 DNA repair and recombination proteins [BR:shis03400]
    125217082
Enzymes [BR:shis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125217082
DNA replication proteins [BR:shis03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    125217082
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      125217082
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 125217082
NCBI-ProteinID: XP_047974863
LinkDB
Position
3:43621678..43641069
AA seq 2215 aa
MNGSDNRRKDRWDSRISKKQQLILNAEEQLESKLGFDLFTQGDTRLGWLLTFASSSWEDR
ETNKVHSCVDLYFVCQDGSMFKAKYKFRPYFYAATKEKMETDVEAYLRRRYEGQIADIEI
VEKEDLNLKNHLSGLHKCYLKISFDTVQQLMQVKKDLVHVVERNKAKMDAEDAYESILAG
KSKQRLQDFIDCINDLREFDVPYHVRFAIDKDIRCGQWYDVSVSSSGVIVERRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDSIMMISYMIDGQGYLIINRECVGEDIEDLEYTPKPE
FEGCFKVKNVKDEKGLLSLWFAHMQDVKPGIYVTYNGDFFDWPFLETRAAHHGYNMNEEL
GFRCDKVQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKSVTKAKLGYDPLEVNPEDMVR
YAKERPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLM
VQAYQANVICPNKHQSDPEKFYHNQLLESETYIGGHVECLESGVFRSDLPTSFKLDPAAY
EQLIDNLDRDLQYAIIVEGKMDLESVTNYDEVKNAIWEKLVKLRDDPICEEFPLIYHLDV
AAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKNCLRTLEWVWRGETYMAKRSDYYHIK
RQLESEFVDGMNGKLSNSFLDLPKAEQQVRLKERLKKYCQKAYKRVLDKPITEVREAGIC
MRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIRIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVERIGRPLELDTDGIWCC
LPGSFPENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNDQYQNLKDPFSKTYTTHSECS
IEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLRGSTLEECYSAVAAVANRWLDLLDNQGEDVTDSELLDYISESSTMSKSLADYGQ
QKSCPVTTAKRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETEPEIMKF
YVKKWCKVSSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVIHPDWLHKK
VKEKDDKFRQRKLVDIFNRKEKDDAVGLSGYPHTIDVQNITDMEDFRSGKTPPVRPQPIV
HSFVIHNEQHQVETNSLGGSTEQNDIQTGQNQSTHPLQKAPEETIDRFVDYQGWLESRKR
KWRGTREKRKRQRLNIVNDVEAPSGSANNRHALGGVGVNSYFQRHDLALTRCHWQIIQLE
PSGQHGKFFAWVVVEGAMRKIPILVPRVFYLNSKAPVTEEFPGRRVNKILPHGHQSYNLI
EVIIDEDQFRTESKKLAAHLADPEVEGIYETKISPEFNAILQIGCVCKVDKSAKIRNFQD
GWSLSELHMKTTTECPYLEHSYNFFYLYHSICDSRAIFVAYFPASSQIAVVVVSPFQSKE
LSSQMLDRQFREATSQALSTQTTTNEDITFKVDYVGHVKDAQGNLQRMITEYRHRHHGPV
IAVIECPNIQLLKSGIRSLEDYPCVTIPSNARDSKYQAIGWQVIAAKIGLQRCAASSQWL
NERVTLSRYAHVPLGNFEVDWLIHTADIFFSRALRDQQQVLWISDNGFPDLGGTTEDVPC
FIDEVNQPILTYPGAYRKVTVELKIHHLTVNALLKSNQVNEMEGGALFGFDQDMNSSSSN
TEKQYCYDEEISCAPAFRALKQLIQRCLADAVTSGNVFADAVLQHLYRWLCSPISKLHDP
ALHRMLHKVMQKVFALLLAEFRKLGATIVFASFSRIIIDTEKSDLSAAKAYCDSVLKTLQ
TSRDLFEWIELEPFQFWHSLLFMDQYNYGGIQARSEDRPTEECTSAVAESVCTDSQVEIV
SNWAIAENLTKVTQDHFILIVSEFLYFPWKFAQEEAAKRASGMGDLCTPSITAATAEILE
SQKTEFLKKKIASDFTDKLLKIVCDPHLHIKGRNQSEIDPPESSHSSTNVQKGDAALDFI
KYVCAVLALDQNVQHEILVMRRNLLKLVRVREFAPEAEFQNLRTSLTLPNVICSYCNDCR
DLDLCRDKGLIGQEWRCGVAQCGQAYDREVIENALLQIIRQRERLYHLQDLVCLKCNQIK
AAHLAEHCSCAGSFVCREDSAEFCNKMQTFQNVAVDQKFQLLQESVSWILQVKWL
NT seq 6648 nt   +upstreamnt  +downstreamnt
atgaatggcagcgacaataggcgcaaagatcggtgggattctcgtatttcaaagaagcag
cagctgattctaaatgcggaggagcagcttgaatccaagctcggatttgatctcttcacc
caaggagatacacgcctcggctggttacttactttcgcctcttcgtcttgggaggaccgg
gaaactaataaggtgcacagttgcgtcgatttgtactttgtctgccaggatggttcaatg
tttaaggcgaagtataagtttcgaccttatttttatgctgccaccaaggaaaaaatggaa
accgatgttgaggcgtatttgagaaggcgttatgagggccaaattgcagatattgaaatt
gtagagaaagaagatcttaatcttaaaaatcacttgtctggtctgcacaagtgctattta
aagatatcttttgatactgttcaacaactaatgcaagtcaagaaagatcttgttcatgtt
gttgaaagaaacaaagcaaagatggacgccgaggatgcgtatgagtccatattggcaggg
aaaagcaaacagcggctccaagattttatcgattgtatcaatgatctacgtgaatttgat
gtaccctatcatgttcgctttgcaattgacaaagatataaggtgtggacagtggtatgat
gtaagtgtatccagctctggggttatagtggaaaggagaacagatctgttgcaacgggca
gaagttcatgtctgtgcttttgatattgagaccacaaagctgccgttaaaatttccagat
gcagaatatgattcaatcatgatgatttcgtacatgattgatggccaagggtacctaatc
attaatagagagtgtgttggggaggatatagaggatttggagtacactcccaaaccagag
ttcgaaggttgcttcaaagtgaaaaatgttaaagatgagaaaggactacttagcttgtgg
tttgctcatatgcaagatgtaaagcctggcatatacgtgacatacaatggagactttttt
gattggccattcctggagaccagagcagcccatcatggttacaacatgaatgaagaactt
ggatttcgatgtgacaaagttcaaggtgaatgccgtgccaaatttgcttgccatctggat
tgttttgcttgggttaaacgtgatagttatctacctcaaggcagccaaggcttaaagtct
gttacgaaagctaaattgggctacgatcctttagaagtcaatcctgaggatatggttcgc
tatgcaaaagaaaggccgcagatgatggcatcatattccgtttctgatgctgtttctacc
tactacctatatatgacatatgtacacccctttattttctccttagcaaccataattccc
atgccaccagacgaagttttaagaaaaggaagtgggacactttgtgaaatgcttctcatg
gttcaggcataccaagcaaatgttatctgtcctaataagcaccaatctgatccagagaaa
ttttaccacaatcaactccttgagagtgagacatacattgggggccatgtggagtgccta
gaaagtggagtttttagatctgaccttccaacaagtttcaaacttgatccagctgcttat
gagcaattaatagacaatctagaccgggacctgcaatatgctatcatagtggaaggaaag
atggatctagaatcagttacgaattatgatgaagttaagaatgccatttgggaaaagcta
gtgaaactgcgagatgacccaatatgtgaagaatttcctctcatatatcatcttgatgtt
gctgctatgtatccaaacatcattttaacaaacaggcttcagccaccttcaattgtcacg
gatgaaatatgcactgcatgcgattttaatcgtcctggaaaaaattgccttaggacgctt
gaatgggtttggcgtggagagacatacatggcaaagagaagtgattattatcatataaag
aggcaacttgagtctgagtttgttgatggcatgaatggaaagttatccaactctttcctt
gacctgcctaaagcagaacaacaagtgagactaaaggagcgactaaaaaaatactgccaa
aaggcatataaaagggtattggataaacctattactgaagttcgagaagcagggatctgc
atgcgtgaaaacccattctatgttgacactgtccgcagctttcgagatagaaggtatgaa
tacaaagggcttaataaagtttggaagggaaagttgtcagaagcaaaagccagtgggaac
tctatcagaatccaggaagcacaagacatggtagtgctttatgattcactgcaacttgct
cataagtgcattctcaactccttctatggctatgttatgcgcaagggtgcaaggtggtat
tcaatggaaatggctggggttgttacgtataccggagctaaaataattcagaatgcacgc
ttactggtagaaagaattgggaggcctcttgagttagacaccgatggtatctggtgttgt
ctacctggatctttcccagagaacttcacattcaagacaaaagactcaaagaagaagctg
acaatttcatatccatgtgtcatgctaaatgtggatgtggctagaaacaacaccaatgat
caataccagaatctaaaagatcctttcagtaagacatatacaacgcatagtgaatgctca
attgagtttgaggtggatgggccatataaggcaatgattataccagcttccaaggaggaa
gggattttgataaagaaacggtatgcagttttcaatgatgatggtaccctagctgaactc
aagggttttgagatcaagcgaagaggcgagctgaagctgatcaaagttttccaggcagag
ctttttgataagttccttcgagggtcaaccttagaagagtgttattcagctgttgctgct
gttgcaaatcgctggcttgaccttcttgataaccaaggagaggacgtcacagatagcgaa
ttgcttgattatatatcagaatcaagtacaatgagcaagtccttagcagattatggacaa
caaaagtcatgcccagtaacaacagcaaagcgcttagctgatttccttggggatgccatg
gttaaagataaaggattgcgctgtcagtatattgttgcttgtgaaccgaagggaacccca
gtaagtgaacgtgctgttcctgttgcaatttttgagactgaaccagaaattatgaagttt
tatgtgaagaagtggtgcaaagtctcatcagatgttggcatccggtcaatcattgattgg
tcatactacaaacaaaggcttagttcagctattcaaaaaattatcacaatcccagctgcc
atgcaaaaggttgcaaaccctgtcccaagggttattcatcctgattggttgcacaagaaa
gttaaagaaaaagatgacaagtttcgccagcggaagttggttgatattttcaaccgaaaa
gaaaaagatgatgctgtgggattgagtggttatcctcacactatagatgtacagaatatt
acagacatggaagactttagatctggaaaaactcctcctgtgagacctcaacctattgtt
cattcattcgtgatccataatgaacagcatcaagttgaaacgaatagtcttggggggagt
acggagcaaaatgatatacaaactggacaaaatcagtctactcatccattgcaaaaggct
cctgaagagactattgatagatttgtcgactatcaaggatggttggagtcaaggaagaga
aagtggagagggactcgggaaaaaaggaaacgccaacggttaaacattgtaaatgatgtg
gaggcacccagtggctctgcaaataacagacatgctctcggtggagttggggtgaattcc
tatttccagaggcatgacttagccctcacccgttgccattggcagatcattcagctcgaa
ccaagtggacagcatggcaaattttttgcttgggtagttgtagaaggagcaatgcgtaag
atccccatattagttcccagagtattctacctcaactccaaggcccctgtaacagaagaa
ttccctggaaggcgtgtaaacaagattcttccccacggacaccaaagctacaaccttatt
gaggtcataattgatgaagaccaatttaggaccgaaagcaagaaattagccgctcacctt
gcagatcctgaagttgagggaatatatgaaaccaagatttcaccggagtttaatgccatc
cttcagattggttgtgtctgtaaagtggacaaatcagcaaaaataagaaacttccaagat
ggctggagtttgagtgaattgcacatgaagacaacaactgagtgcccatatctggagcat
tcatataatttcttctacttgtatcatagcatctgtgacagccgagccatttttgttgca
tattttcctgcatcaagccaaatagctgttgtggtagtcagtcctttccagagtaaggaa
ttgtcatcacaaatgctagatagacaatttcgtgaagctactagccaagcactatccacg
caaactactacaaatgaagacattactttcaaggtggactatgttgggcatgtcaaagat
gctcaaggaaacttgcagaggatgataaccgaatacagacatcggcatcatggacctgta
atcgctgttatagagtgccctaatattcagttattgaagtctggcattaggtcactggaa
gactatccttgtgtaaccataccctccaatgctcgtgatagcaaatatcaggctattggt
tggcaagtaattgctgcaaaaattggactacaacgatgtgctgcttcatcacaatggttg
aatgagagagttacactttcacgatatgcccatgttccattaggaaattttgaagttgac
tggctcatacacactgctgatatatttttctcaagagctttgcgtgatcagcaacaggtt
ttgtggatatctgataatggcttcccagacttgggaggcactactgaagatgtaccgtgt
tttatagatgaagtcaatcaacctatcctcacttaccctggtgcatataggaaagttaca
gttgaacttaagattcatcacctaactgtcaatgctcttctaaaaagtaaccaagtgaat
gaaatggaaggaggagcattatttggtttcgatcaggatatgaattcatcttcatctaat
acagagaaacaatattgttatgatgaggaaatttcctgtgctcctgcatttcgtgctctg
aagcaattaatccagagatgccttgctgacgcagttacatcaggaaatgtgtttgcagat
gctgtattacagcatctctaccgatggctttgcagtccaatatctaaacttcatgaccca
gctctccatcgcatgcttcataaggttatgcaaaaggtgtttgctttgcttctggcggag
ttccgtaaattaggtgcaacaattgtatttgcaagcttcagcagaattataattgatact
gaaaagtcagatctatctgcagcaaaagcttactgtgatagtgtacttaaaactctgcag
acaagcagggacttgtttgagtggattgaacttgaacctttccagttttggcattcccta
ctcttcatggatcagtacaactatggtggaattcaagctagatcagaagatagacccaca
gaagaatgtactagtgctgttgcagaaagtgtgtgcactgactctcaagtagaaatcgtc
tccaactgggccatagcagaaaacttgacaaaagtaactcaggatcactttatcttaatt
gtatcagaatttttgtattttccatggaagtttgcgcaagaagaagcagcaaaacgagca
tctggcatgggagacctgtgcactccatcaatcacagctgctactgctgagattcttgaa
tcacagaaaacagagttcctgaagaaaaagattgcatctgactttacggacaaacttctc
aaaattgtatgtgatccacatcttcacataaaaggaagaaaccagtctgagattgatcct
cctgaaagttcgcattcttcaaccaatgtccaaaagggagatgctgctctagatttcatc
aagtatgtctgtgcagttttggcacttgaccaaaatgttcagcatgaaatcctggttatg
agaaggaatcttctgaaattggtacgcgtgagagaattcgctcctgaggctgaatttcag
aatctacggacatctttaactttaccgaatgtcatttgcagttactgcaacgactgcagg
gatcttgatctgtgtcgtgacaagggattaatcgggcaggaatggcgttgtggtgtggct
caatgcgggcaagcttacgaccgtgaagtgattgagaatgctctcctccagattattcgg
cagagggaaaggctgtaccaccttcaagaccttgtgtgcctcaaatgcaatcagattaaa
gctgcacatttagccgagcattgctcgtgtgctggatcatttgtttgcagggaagattca
gctgagttctgcaacaaaatgcagactttccagaatgtggcggtggatcagaagtttcag
ctcctccaagaaagtgtgtcttggatcttacaagtcaaatggctgtga

DBGET integrated database retrieval system